Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.57■■□□□ 1.04
SMARCC1Q92922 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC1Q92922 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC1Q92922 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC1Q92922 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC1Q92922 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC1Q92922 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC1Q92922 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC1Q92922 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC1Q92922 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC1Q92922 ARSEP1-201ENST00000420443 635 ntBASIC21.56■■□□□ 1.04
SMARCC1Q92922 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 AC009407.1-201ENST00000568958 598 ntBASIC21.56■■□□□ 1.04
SMARCC1Q92922 MIR4492-201ENST00000581627 80 ntBASIC21.56■■□□□ 1.04
SMARCC1Q92922 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.56■■□□□ 1.04
SMARCC1Q92922 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC1Q92922 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC1Q92922 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.56■■□□□ 1.04
SMARCC1Q92922 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 KRT8P49-201ENST00000604166 1432 ntBASIC21.55■■□□□ 1.04
SMARCC1Q92922 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 AL353705.2-201ENST00000428243 662 ntBASIC21.55■■□□□ 1.04
SMARCC1Q92922 AL353779.1-201ENST00000434793 351 ntBASIC21.55■■□□□ 1.04
SMARCC1Q92922 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 TEX28P1-201ENST00000613479 1221 ntBASIC21.55■■□□□ 1.04
SMARCC1Q92922 TEX28P2-201ENST00000617764 1221 ntBASIC21.55■■□□□ 1.04
SMARCC1Q92922 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 AL021920.2-201ENST00000624828 1351 ntBASIC21.55■■□□□ 1.04
SMARCC1Q92922 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SMARCC1Q92922 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC1Q92922 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCC1Q92922 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 AC008738.7-201ENST00000609744 511 ntBASIC21.54■■□□□ 1.04
SMARCC1Q92922 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCC1Q92922 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCC1Q92922 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 CETN4P-206ENST00000642099 2168 ntBASIC21.54■■□□□ 1.04
SMARCC1Q92922 FOXO1B-201ENST00000504678 1527 ntBASIC21.54■■□□□ 1.04
SMARCC1Q92922 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
SMARCC1Q92922 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCC1Q92922 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SMARCC1Q92922 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCC1Q92922 LINC00896-202ENST00000609602 2128 ntBASIC21.53■■□□□ 1.04
SMARCC1Q92922 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCC1Q92922 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SMARCC1Q92922 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCC1Q92922 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms