Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 TUBB8P12-201ENST00000308911 1335 ntBASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 TUBB7P-202ENST00000428444 1305 ntBASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 TUBB8P7-204ENST00000567960 1332 ntBASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 AC108073.2-201ENST00000464002 357 ntBASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC148Q8NFR7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 AL021920.2-201ENST00000624828 1351 ntBASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 CROCCP1-201ENST00000426910 5675 ntBASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 MRPL20P1-201ENST00000400819 433 ntBASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 AC108751.1-201ENST00000490852 363 ntBASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 DUX4L17-201ENST00000557360 1267 ntBASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC148Q8NFR7 AC124067.4-201ENST00000519691 2379 ntBASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 AL121761.2-201ENST00000598007 1648 ntBASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 RNA5SP415-201ENST00000517246 115 ntBASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 UNC93B6-202ENST00000528242 690 ntBASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms