Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 KRT18P27-201ENST00000427733 1299 ntBASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 AC093909.1-201ENST00000504731 1122 ntBASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 AP002469.2-201ENST00000531724 424 ntBASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 AC060834.1-201ENST00000443027 2032 ntBASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 PTCHD3P3-201ENST00000403073 906 ntBASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 AC104692.2-201ENST00000603054 253 ntBASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 FER1L4-210ENST00000615531 5998 ntBASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 AC006504.4-201ENST00000592118 1568 ntBASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 PI4KAP1-204ENST00000612579 1703 ntBASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRFBP1Q8NEF9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 ELK2BP-201ENST00000415014 1224 ntBASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 PAWRP1-201ENST00000451083 565 ntBASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms