Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC013467.2-201ENST00000605472 835 ntBASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 HILS1-202ENST00000545329 423 ntBASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 DGCR5-201ENST00000399539 862 ntBASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 TP53TG3HP-202ENST00000569755 579 ntBASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 AC132938.2-201ENST00000579188 680 ntBASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 SPTSSB-204ENST00000617024 1292 ntBASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 AL591163.1-201ENST00000641757 987 ntBASIC15.78■□□□□ 0.12
COL27A1Q8IZC6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 NOC2LP1-202ENST00000452600 2235 ntBASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 SLC7A15P-201ENST00000424028 1363 ntBASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL27A1Q8IZC6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 ACA64.2-201ENST00000459014 129 ntBASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 AC061975.2-201ENST00000581722 295 ntBASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL27A1Q8IZC6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 GIMAP3P-201ENST00000495150 836 ntBASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 AL035456.1-201ENST00000456064 1369 ntBASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms