Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SWSAP1Q6NVH7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SWSAP1Q6NVH7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SWSAP1Q6NVH7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.89■□□□□ 0.62
SWSAP1Q6NVH7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SWSAP1Q6NVH7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
SWSAP1Q6NVH7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 AC254562.1-201ENST00000417586 456 ntBASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 KRT8P49-201ENST00000604166 1432 ntBASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SWSAP1Q6NVH7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 AC002056.1-201ENST00000395613 760 ntBASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 MPDU1-223ENST00000582151 728 ntBASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 AC092068.3-201ENST00000587894 2016 ntBASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SWSAP1Q6NVH7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms