Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2B3Q16720 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B3Q16720 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B3Q16720 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.81■□□□□ 0.92
ATP2B3Q16720 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B3Q16720 AP006288.1-201ENST00000446065 395 ntBASIC20.81■□□□□ 0.92
ATP2B3Q16720 DNAJB3-202ENST00000449667 1266 ntBASIC20.81■□□□□ 0.92
ATP2B3Q16720 CEND1P1-201ENST00000451006 455 ntBASIC20.81■□□□□ 0.92
ATP2B3Q16720 AC092183.1-201ENST00000469884 875 ntBASIC20.81■□□□□ 0.92
ATP2B3Q16720 AL031432.2-201ENST00000566714 459 ntBASIC20.81■□□□□ 0.92
ATP2B3Q16720 AL928711.1-201ENST00000570165 459 ntBASIC20.81■□□□□ 0.92
ATP2B3Q16720 AC005412.3-201ENST00000580309 715 ntBASIC20.81■□□□□ 0.92
ATP2B3Q16720 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2B3Q16720 AL645728.2-201ENST00000641974 660 ntBASIC20.81■□□□□ 0.92
ATP2B3Q16720 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATP2B3Q16720 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B3Q16720 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B3Q16720 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B3Q16720 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B3Q16720 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B3Q16720 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2B3Q16720 AC141586.5-201ENST00000624546 2050 ntBASIC20.81■□□□□ 0.92
ATP2B3Q16720 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B3Q16720 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.8■□□□□ 0.92
ATP2B3Q16720 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B3Q16720 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B3Q16720 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B3Q16720 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B3Q16720 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B3Q16720 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 MIR4515-201ENST00000584082 81 ntBASIC20.8■□□□□ 0.92
ATP2B3Q16720 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 AC092902.6-201ENST00000641783 218 ntBASIC20.8■□□□□ 0.92
ATP2B3Q16720 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B3Q16720 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B3Q16720 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2B3Q16720 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2B3Q16720 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2B3Q16720 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2B3Q16720 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2B3Q16720 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2B3Q16720 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2B3Q16720 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.79■□□□□ 0.92
ATP2B3Q16720 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.79■□□□□ 0.92
ATP2B3Q16720 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.79■□□□□ 0.92
ATP2B3Q16720 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2B3Q16720 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2B3Q16720 AC079781.4-201ENST00000641908 219 ntBASIC20.79■□□□□ 0.92
ATP2B3Q16720 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2B3Q16720 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2B3Q16720 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2B3Q16720 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2B3Q16720 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2B3Q16720 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.79■□□□□ 0.92
ATP2B3Q16720 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ATP2B3Q16720 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2B3Q16720 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2B3Q16720 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2B3Q16720 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 TOP3BP1-201ENST00000420768 1380 ntBASIC20.78■□□□□ 0.92
ATP2B3Q16720 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2B3Q16720 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.78■□□□□ 0.92
ATP2B3Q16720 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.78■□□□□ 0.92
ATP2B3Q16720 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.78■□□□□ 0.92
ATP2B3Q16720 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.78■□□□□ 0.92
ATP2B3Q16720 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP2B3Q16720 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2B3Q16720 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2B3Q16720 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2B3Q16720 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2B3Q16720 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2B3Q16720 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ATP2B3Q16720 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms