Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 AL645728.1-201ENST00000366221 2101 ntBASIC14.88□□□□□ -0.03
HIST1H3AP68431 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.88□□□□□ -0.03
HIST1H3AP68431 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 LAGE3P1-201ENST00000425356 484 ntBASIC14.88□□□□□ -0.03
HIST1H3AP68431 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.88□□□□□ -0.03
HIST1H3AP68431 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 AF228730.7-201ENST00000641842 219 ntBASIC14.88□□□□□ -0.03
HIST1H3AP68431 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 TNRC18P3-201ENST00000441896 2691 ntBASIC14.88□□□□□ -0.03
HIST1H3AP68431 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 AC084018.2-201ENST00000613093 2607 ntBASIC14.87□□□□□ -0.03
HIST1H3AP68431 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 AL139384.1-201ENST00000612143 3047 ntBASIC14.87□□□□□ -0.03
HIST1H3AP68431 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 PTCHD3P3-201ENST00000403073 906 ntBASIC14.87□□□□□ -0.03
HIST1H3AP68431 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
HIST1H3AP68431 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H3AP68431 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms