Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP1S2P56377 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
AP1S2P56377 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.58■□□□□ 0.24
AP1S2P56377 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S2P56377 RPS2P28-201ENST00000314255 741 ntBASIC16.58■□□□□ 0.24
AP1S2P56377 ELK2BP-201ENST00000415014 1224 ntBASIC16.58■□□□□ 0.24
AP1S2P56377 KRT18P27-201ENST00000427733 1299 ntBASIC16.58■□□□□ 0.24
AP1S2P56377 KRT18P67-201ENST00000432816 1264 ntBASIC16.58■□□□□ 0.24
AP1S2P56377 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S2P56377 FAM197Y8-203ENST00000450145 560 ntBASIC16.58■□□□□ 0.24
AP1S2P56377 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S2P56377 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.58■□□□□ 0.24
AP1S2P56377 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.58■□□□□ 0.24
AP1S2P56377 RN7SL510P-201ENST00000581311 263 ntBASIC16.58■□□□□ 0.24
AP1S2P56377 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.58■□□□□ 0.24
AP1S2P56377 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.58■□□□□ 0.24
AP1S2P56377 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
AP1S2P56377 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.58■□□□□ 0.24
AP1S2P56377 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S2P56377 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
AP1S2P56377 KRT8P49-201ENST00000604166 1432 ntBASIC16.58■□□□□ 0.24
AP1S2P56377 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S2P56377 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S2P56377 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
AP1S2P56377 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.58■□□□□ 0.24
AP1S2P56377 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
AP1S2P56377 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.58■□□□□ 0.24
AP1S2P56377 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S2P56377 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S2P56377 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.58■□□□□ 0.24
AP1S2P56377 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.58■□□□□ 0.24
AP1S2P56377 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S2P56377 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
AP1S2P56377 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S2P56377 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.57■□□□□ 0.24
AP1S2P56377 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.57■□□□□ 0.24
AP1S2P56377 AC006504.4-201ENST00000592118 1568 ntBASIC16.57■□□□□ 0.24
AP1S2P56377 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.57■□□□□ 0.24
AP1S2P56377 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.57■□□□□ 0.24
AP1S2P56377 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 PTCHD3P3-201ENST00000403073 906 ntBASIC16.57■□□□□ 0.24
AP1S2P56377 RPS2P1-201ENST00000434010 821 ntBASIC16.57■□□□□ 0.24
AP1S2P56377 AC018712.1-201ENST00000455767 687 ntBASIC16.57■□□□□ 0.24
AP1S2P56377 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.57■□□□□ 0.24
AP1S2P56377 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.57■□□□□ 0.24
AP1S2P56377 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
AP1S2P56377 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.57■□□□□ 0.24
AP1S2P56377 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.57■□□□□ 0.24
AP1S2P56377 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 TP73-AS1-207ENST00000624167 988 ntBASIC16.57■□□□□ 0.24
AP1S2P56377 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
AP1S2P56377 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
AP1S2P56377 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.57■□□□□ 0.24
AP1S2P56377 PCDHB17P-201ENST00000539533 2393 ntBASIC16.57■□□□□ 0.24
AP1S2P56377 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.57■□□□□ 0.24
AP1S2P56377 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
AP1S2P56377 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S2P56377 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
AP1S2P56377 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
AP1S2P56377 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S2P56377 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.56■□□□□ 0.24
AP1S2P56377 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
AP1S2P56377 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S2P56377 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.56■□□□□ 0.24
AP1S2P56377 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S2P56377 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.56■□□□□ 0.24
AP1S2P56377 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S2P56377 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S2P56377 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
AP1S2P56377 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
AP1S2P56377 AC136632.2-201ENST00000512891 861 ntBASIC16.56■□□□□ 0.24
AP1S2P56377 KRT126P-201ENST00000549467 1181 ntBASIC16.56■□□□□ 0.24
AP1S2P56377 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.56■□□□□ 0.24
AP1S2P56377 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S2P56377 AC008735.5-201ENST00000623544 497 ntBASIC16.56■□□□□ 0.24
AP1S2P56377 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
AP1S2P56377 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S2P56377 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S2P56377 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S2P56377 AC011270.2-201ENST00000624293 2550 ntBASIC16.56■□□□□ 0.24
AP1S2P56377 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S2P56377 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S2P56377 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
AP1S2P56377 PI4KAP1-204ENST00000612579 1703 ntBASIC16.56■□□□□ 0.24
AP1S2P56377 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S2P56377 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.55■□□□□ 0.24
AP1S2P56377 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S2P56377 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms