Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SPDYE22P-201ENST00000582158 798 ntBASIC24.04■■□□□ 1.44
CLTCL1P53675 TEX28P1-201ENST00000613479 1221 ntBASIC24.04■■□□□ 1.44
CLTCL1P53675 TEX28P2-201ENST00000617764 1221 ntBASIC24.04■■□□□ 1.44
CLTCL1P53675 AC004840.1-201ENST00000636359 365 ntBASIC24.04■■□□□ 1.44
CLTCL1P53675 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CLTCL1P53675 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLTCL1P53675 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC24.04■■□□□ 1.44
CLTCL1P53675 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC24.04■■□□□ 1.44
CLTCL1P53675 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CLTCL1P53675 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CLTCL1P53675 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLTCL1P53675 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLTCL1P53675 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLTCL1P53675 GOLGA6L11P-201ENST00000417252 1298 ntBASIC24.03■■□□□ 1.44
CLTCL1P53675 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC24.03■■□□□ 1.44
CLTCL1P53675 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CLTCL1P53675 LY6E-204ENST00000519546 971 ntTSL 2 BASIC24.03■■□□□ 1.44
CLTCL1P53675 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CLTCL1P53675 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CLTCL1P53675 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CLTCL1P53675 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLTCL1P53675 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLTCL1P53675 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC24.03■■□□□ 1.44
CLTCL1P53675 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLTCL1P53675 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLTCL1P53675 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLTCL1P53675 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC24.03■■□□□ 1.44
CLTCL1P53675 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC24.03■■□□□ 1.44
CLTCL1P53675 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLTCL1P53675 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLTCL1P53675 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC24.02■■□□□ 1.44
CLTCL1P53675 METTL26-204ENST00000397665 558 ntTSL 2 BASIC24.02■■□□□ 1.44
CLTCL1P53675 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC24.02■■□□□ 1.44
CLTCL1P53675 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC24.02■■□□□ 1.44
CLTCL1P53675 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC24.02■■□□□ 1.44
CLTCL1P53675 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CLTCL1P53675 AC067852.2-201ENST00000590513 2313 ntBASIC24.02■■□□□ 1.44
CLTCL1P53675 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC24.02■■□□□ 1.44
CLTCL1P53675 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLTCL1P53675 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CLTCL1P53675 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CLTCL1P53675 AP005018.1-201ENST00000525475 301 ntBASIC24.02■■□□□ 1.44
CLTCL1P53675 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC24.02■■□□□ 1.44
CLTCL1P53675 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLTCL1P53675 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CLTCL1P53675 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC24.02■■□□□ 1.44
CLTCL1P53675 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CLTCL1P53675 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLTCL1P53675 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CLTCL1P53675 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CLTCL1P53675 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLTCL1P53675 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLTCL1P53675 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLTCL1P53675 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLTCL1P53675 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CLTCL1P53675 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC24.01■■□□□ 1.43
CLTCL1P53675 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLTCL1P53675 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC24.01■■□□□ 1.43
CLTCL1P53675 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC24.01■■□□□ 1.43
CLTCL1P53675 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC24.01■■□□□ 1.43
CLTCL1P53675 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC24.01■■□□□ 1.43
CLTCL1P53675 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC24.01■■□□□ 1.43
CLTCL1P53675 AC006277.1-201ENST00000624348 1610 ntBASIC24.01■■□□□ 1.43
CLTCL1P53675 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC24.01■■□□□ 1.43
CLTCL1P53675 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC24.01■■□□□ 1.43
CLTCL1P53675 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC24.01■■□□□ 1.43
CLTCL1P53675 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CLTCL1P53675 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLTCL1P53675 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC24■■□□□ 1.43
CLTCL1P53675 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CLTCL1P53675 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CLTCL1P53675 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC24■■□□□ 1.43
CLTCL1P53675 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CLTCL1P53675 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLTCL1P53675 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC24■■□□□ 1.43
CLTCL1P53675 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC24■■□□□ 1.43
CLTCL1P53675 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CLTCL1P53675 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC24■■□□□ 1.43
CLTCL1P53675 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC24■■□□□ 1.43
CLTCL1P53675 GOLGA2P9-201ENST00000596977 1937 ntBASIC24■■□□□ 1.43
CLTCL1P53675 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CLTCL1P53675 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CLTCL1P53675 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLTCL1P53675 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CLTCL1P53675 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLTCL1P53675 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CLTCL1P53675 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLTCL1P53675 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLTCL1P53675 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC23.99■■□□□ 1.43
CLTCL1P53675 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CLTCL1P53675 AC027369.6-201ENST00000525520 931 ntBASIC23.99■■□□□ 1.43
CLTCL1P53675 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC23.99■■□□□ 1.43
CLTCL1P53675 AL133215.2-201ENST00000609242 977 ntBASIC23.99■■□□□ 1.43
CLTCL1P53675 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLTCL1P53675 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLTCL1P53675 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLTCL1P53675 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
CLTCL1P53675 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC23.99■■□□□ 1.43
CLTCL1P53675 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC23.99■■□□□ 1.43
CLTCL1P53675 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms