Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC140658.5-201ENST00000438532 169 ntBASIC17.97■□□□□ 0.47
LHX1P48742 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.97■□□□□ 0.47
LHX1P48742 AC112191.1-201ENST00000523689 701 ntBASIC17.97■□□□□ 0.47
LHX1P48742 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.97■□□□□ 0.47
LHX1P48742 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.97■□□□□ 0.47
LHX1P48742 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.97■□□□□ 0.47
LHX1P48742 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.97■□□□□ 0.47
LHX1P48742 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.97■□□□□ 0.47
LHX1P48742 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.97■□□□□ 0.47
LHX1P48742 AL078644.1-201ENST00000609881 752 ntBASIC17.97■□□□□ 0.47
LHX1P48742 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.97■□□□□ 0.47
LHX1P48742 AC091812.2-201ENST00000619081 385 ntBASIC17.97■□□□□ 0.47
LHX1P48742 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LHX1P48742 PKD1P1-201ENST00000458669 6805 ntBASIC17.97■□□□□ 0.47
LHX1P48742 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LHX1P48742 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX1P48742 AC131009.4-201ENST00000624048 1740 ntBASIC17.97■□□□□ 0.47
LHX1P48742 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
LHX1P48742 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LHX1P48742 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX1P48742 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LHX1P48742 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX1P48742 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 ELL2P1-201ENST00000413990 1906 ntBASIC17.96■□□□□ 0.47
LHX1P48742 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.96■□□□□ 0.47
LHX1P48742 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LHX1P48742 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LHX1P48742 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 AL645608.8-201ENST00000606034 2086 ntBASIC17.96■□□□□ 0.47
LHX1P48742 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.96■□□□□ 0.47
LHX1P48742 AC002056.1-201ENST00000395613 760 ntBASIC17.96■□□□□ 0.47
LHX1P48742 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 AC211486.1-202ENST00000416371 468 ntBASIC17.96■□□□□ 0.47
LHX1P48742 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.96■□□□□ 0.47
LHX1P48742 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
LHX1P48742 AC211476.1-201ENST00000503899 468 ntBASIC17.96■□□□□ 0.47
LHX1P48742 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.96■□□□□ 0.47
LHX1P48742 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.96■□□□□ 0.47
LHX1P48742 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.96■□□□□ 0.47
LHX1P48742 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.96■□□□□ 0.47
LHX1P48742 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX1P48742 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
LHX1P48742 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
LHX1P48742 AC108860.2-201ENST00000562760 2183 ntBASIC17.96■□□□□ 0.46
LHX1P48742 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.96■□□□□ 0.46
LHX1P48742 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LHX1P48742 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 AC092919.2-201ENST00000623631 1645 ntBASIC17.95■□□□□ 0.46
LHX1P48742 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.95■□□□□ 0.46
LHX1P48742 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LHX1P48742 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.95■□□□□ 0.46
LHX1P48742 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.95■□□□□ 0.46
LHX1P48742 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.95■□□□□ 0.46
LHX1P48742 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.95■□□□□ 0.46
LHX1P48742 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.95■□□□□ 0.46
LHX1P48742 MIR4469-201ENST00000583919 79 ntBASIC17.95■□□□□ 0.46
LHX1P48742 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.95■□□□□ 0.46
LHX1P48742 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.95■□□□□ 0.46
LHX1P48742 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.95■□□□□ 0.46
LHX1P48742 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 AL691403.2-201ENST00000618460 490 ntBASIC17.95■□□□□ 0.46
LHX1P48742 AC079781.4-201ENST00000641908 219 ntBASIC17.95■□□□□ 0.46
LHX1P48742 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LHX1P48742 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LHX1P48742 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 AC005332.8-201ENST00000622750 2735 ntBASIC17.95■□□□□ 0.46
LHX1P48742 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LHX1P48742 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX1P48742 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.95■□□□□ 0.46
LHX1P48742 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
LHX1P48742 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.95■□□□□ 0.46
LHX1P48742 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms