Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NEDD4P46934 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEDD4P46934 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEDD4P46934 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.99■□□□□ 0.79
NEDD4P46934 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NEDD4P46934 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 TUBB8P12-201ENST00000308911 1335 ntBASIC19.98■□□□□ 0.79
NEDD4P46934 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 TUBB7P-202ENST00000428444 1305 ntBASIC19.98■□□□□ 0.79
NEDD4P46934 TUBB8P7-204ENST00000567960 1332 ntBASIC19.98■□□□□ 0.79
NEDD4P46934 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NEDD4P46934 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
NEDD4P46934 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
NEDD4P46934 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.98■□□□□ 0.79
NEDD4P46934 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.98■□□□□ 0.79
NEDD4P46934 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.98■□□□□ 0.79
NEDD4P46934 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.98■□□□□ 0.79
NEDD4P46934 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.98■□□□□ 0.79
NEDD4P46934 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.98■□□□□ 0.79
NEDD4P46934 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.98■□□□□ 0.79
NEDD4P46934 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.98■□□□□ 0.79
NEDD4P46934 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NEDD4P46934 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
NEDD4P46934 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.98■□□□□ 0.79
NEDD4P46934 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.98■□□□□ 0.79
NEDD4P46934 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.98■□□□□ 0.79
NEDD4P46934 MPDU1-223ENST00000582151 728 ntBASIC19.98■□□□□ 0.79
NEDD4P46934 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.98■□□□□ 0.79
NEDD4P46934 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.98■□□□□ 0.79
NEDD4P46934 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.98■□□□□ 0.79
NEDD4P46934 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
NEDD4P46934 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
NEDD4P46934 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEDD4P46934 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.98■□□□□ 0.79
NEDD4P46934 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
NEDD4P46934 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEDD4P46934 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEDD4P46934 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NEDD4P46934 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NEDD4P46934 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NEDD4P46934 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.97■□□□□ 0.79
NEDD4P46934 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NEDD4P46934 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NEDD4P46934 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEDD4P46934 AL645728.1-201ENST00000366221 2101 ntBASIC19.97■□□□□ 0.79
NEDD4P46934 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.97■□□□□ 0.79
NEDD4P46934 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
NEDD4P46934 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEDD4P46934 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEDD4P46934 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEDD4P46934 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NEDD4P46934 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEDD4P46934 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
NEDD4P46934 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.97■□□□□ 0.79
NEDD4P46934 KRT19P2-202ENST00000557173 1012 ntBASIC19.97■□□□□ 0.79
NEDD4P46934 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEDD4P46934 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NEDD4P46934 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.97■□□□□ 0.79
NEDD4P46934 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.97■□□□□ 0.79
NEDD4P46934 AC004877.2-201ENST00000623941 599 ntBASIC19.97■□□□□ 0.79
NEDD4P46934 AC124067.4-201ENST00000519691 2379 ntBASIC19.97■□□□□ 0.79
NEDD4P46934 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
NEDD4P46934 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NEDD4P46934 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
NEDD4P46934 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.96■□□□□ 0.79
NEDD4P46934 AC078925.2-201ENST00000624013 1973 ntBASIC19.96■□□□□ 0.79
NEDD4P46934 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
NEDD4P46934 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NEDD4P46934 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.96■□□□□ 0.79
NEDD4P46934 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.96■□□□□ 0.79
NEDD4P46934 AL513480.1-201ENST00000451731 511 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms