Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRPHP41219 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRPHP41219 AC078925.2-201ENST00000624013 1973 ntBASIC19.23■□□□□ 0.67
PRPHP41219 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPHP41219 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPHP41219 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPHP41219 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPHP41219 AC011676.5-201ENST00000624864 2660 ntBASIC19.22■□□□□ 0.67
PRPHP41219 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPHP41219 AC002310.6-201ENST00000624451 1377 ntBASIC19.22■□□□□ 0.67
PRPHP41219 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPHP41219 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPHP41219 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.22■□□□□ 0.67
PRPHP41219 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPHP41219 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRPHP41219 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPHP41219 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PRPHP41219 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.22■□□□□ 0.67
PRPHP41219 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.22■□□□□ 0.67
PRPHP41219 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.22■□□□□ 0.67
PRPHP41219 MIR1199-201ENST00000621445 119 ntBASIC19.22■□□□□ 0.67
PRPHP41219 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRPHP41219 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPHP41219 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRPHP41219 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.22■□□□□ 0.67
PRPHP41219 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPHP41219 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.22■□□□□ 0.67
PRPHP41219 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRPHP41219 LINC00895-201ENST00000629028 1637 ntBASIC19.22■□□□□ 0.67
PRPHP41219 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.21■□□□□ 0.67
PRPHP41219 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 TOP3BP1-201ENST00000420768 1380 ntBASIC19.21■□□□□ 0.67
PRPHP41219 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPHP41219 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPHP41219 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PRPHP41219 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.21■□□□□ 0.67
PRPHP41219 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PRPHP41219 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.21■□□□□ 0.67
PRPHP41219 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.21■□□□□ 0.67
PRPHP41219 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.21■□□□□ 0.67
PRPHP41219 RNA5SP419-201ENST00000515908 135 ntBASIC19.21■□□□□ 0.67
PRPHP41219 IGHV3-65-201ENST00000523210 341 ntBASIC19.21■□□□□ 0.67
PRPHP41219 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPHP41219 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.21■□□□□ 0.67
PRPHP41219 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.21■□□□□ 0.67
PRPHP41219 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPHP41219 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 REXO1L3P-201ENST00000622202 1288 ntBASIC19.21■□□□□ 0.67
PRPHP41219 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPHP41219 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPHP41219 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 AP002414.3-201ENST00000589352 1468 ntBASIC19.21■□□□□ 0.67
PRPHP41219 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPHP41219 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPHP41219 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
PRPHP41219 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.2■□□□□ 0.66
PRPHP41219 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PRPHP41219 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.2■□□□□ 0.66
PRPHP41219 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PRPHP41219 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.2■□□□□ 0.66
PRPHP41219 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.2■□□□□ 0.66
PRPHP41219 AL031284.1-201ENST00000419297 478 ntBASIC19.2■□□□□ 0.66
PRPHP41219 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
PRPHP41219 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.2■□□□□ 0.66
PRPHP41219 SLC25A6P2-201ENST00000497974 877 ntBASIC19.2■□□□□ 0.66
PRPHP41219 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.2■□□□□ 0.66
PRPHP41219 MIR7706-201ENST00000613747 67 ntBASIC19.2■□□□□ 0.66
PRPHP41219 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.2■□□□□ 0.66
PRPHP41219 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.2■□□□□ 0.66
PRPHP41219 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.2■□□□□ 0.66
PRPHP41219 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.2■□□□□ 0.66
PRPHP41219 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
PRPHP41219 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPHP41219 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms