Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.18■□□□□ 0.34
VCLP18206 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.18■□□□□ 0.34
VCLP18206 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.18■□□□□ 0.34
VCLP18206 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
VCLP18206 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.18■□□□□ 0.34
VCLP18206 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.18■□□□□ 0.34
VCLP18206 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
VCLP18206 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
VCLP18206 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.18■□□□□ 0.34
VCLP18206 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.18■□□□□ 0.34
VCLP18206 SART3-203ENST00000546611 1184 ntBASIC17.18■□□□□ 0.34
VCLP18206 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.18■□□□□ 0.34
VCLP18206 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.18■□□□□ 0.34
VCLP18206 AL139327.4-201ENST00000612362 153 ntBASIC17.18■□□□□ 0.34
VCLP18206 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
VCLP18206 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 AC132938.5-201ENST00000624980 1813 ntBASIC17.18■□□□□ 0.34
VCLP18206 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
VCLP18206 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
VCLP18206 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
VCLP18206 PCDHA14-201ENST00000506751 2298 ntBASIC17.18■□□□□ 0.34
VCLP18206 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.18■□□□□ 0.34
VCLP18206 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.18■□□□□ 0.34
VCLP18206 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.18■□□□□ 0.34
VCLP18206 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.18■□□□□ 0.34
VCLP18206 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.18■□□□□ 0.34
VCLP18206 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCLP18206 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.18■□□□□ 0.34
VCLP18206 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.17■□□□□ 0.34
VCLP18206 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
VCLP18206 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.17■□□□□ 0.34
VCLP18206 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.17■□□□□ 0.34
VCLP18206 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.17■□□□□ 0.34
VCLP18206 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 PRYP5-201ENST00000451909 266 ntBASIC17.17■□□□□ 0.34
VCLP18206 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.17■□□□□ 0.34
VCLP18206 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
VCLP18206 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.17■□□□□ 0.34
VCLP18206 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.17■□□□□ 0.34
VCLP18206 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.17■□□□□ 0.34
VCLP18206 AC016396.2-201ENST00000562575 1417 ntBASIC17.17■□□□□ 0.34
VCLP18206 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.17■□□□□ 0.34
VCLP18206 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
VCLP18206 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.17■□□□□ 0.34
VCLP18206 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VCLP18206 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VCLP18206 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.17■□□□□ 0.34
VCLP18206 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.17■□□□□ 0.34
VCLP18206 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.17■□□□□ 0.34
VCLP18206 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCLP18206 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VCLP18206 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
VCLP18206 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VCLP18206 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VCLP18206 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VCLP18206 PCDHA1-201ENST00000378133 2726 ntBASIC17.16■□□□□ 0.34
VCLP18206 AC009336.1-201ENST00000608941 1553 ntBASIC17.16■□□□□ 0.34
VCLP18206 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
VCLP18206 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VCLP18206 AGGF1P2-201ENST00000426656 2106 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms