Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP3A4P08684 MIR1233-2-201ENST00000408138 82 ntBASIC19.04■□□□□ 0.64
CYP3A4P08684 MIR1233-1-201ENST00000408722 82 ntBASIC19.04■□□□□ 0.64
CYP3A4P08684 PMS2P4-201ENST00000412466 1052 ntBASIC19.04■□□□□ 0.64
CYP3A4P08684 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CYP3A4P08684 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.04■□□□□ 0.64
CYP3A4P08684 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP3A4P08684 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP3A4P08684 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.04■□□□□ 0.64
CYP3A4P08684 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP3A4P08684 AC099522.2-201ENST00000607001 744 ntBASIC19.04■□□□□ 0.64
CYP3A4P08684 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP3A4P08684 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP3A4P08684 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CYP3A4P08684 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CYP3A4P08684 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP3A4P08684 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CYP3A4P08684 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP3A4P08684 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CYP3A4P08684 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.03■□□□□ 0.64
CYP3A4P08684 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.03■□□□□ 0.64
CYP3A4P08684 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.03■□□□□ 0.64
CYP3A4P08684 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.03■□□□□ 0.64
CYP3A4P08684 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CYP3A4P08684 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.03■□□□□ 0.64
CYP3A4P08684 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.03■□□□□ 0.64
CYP3A4P08684 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
CYP3A4P08684 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.03■□□□□ 0.64
CYP3A4P08684 MIR4469-201ENST00000583919 79 ntBASIC19.03■□□□□ 0.64
CYP3A4P08684 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.03■□□□□ 0.64
CYP3A4P08684 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.03■□□□□ 0.64
CYP3A4P08684 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.03■□□□□ 0.64
CYP3A4P08684 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
CYP3A4P08684 AL031055.1-201ENST00000606362 631 ntBASIC19.03■□□□□ 0.64
CYP3A4P08684 GPALPP1-207ENST00000611650 899 ntBASIC19.03■□□□□ 0.64
CYP3A4P08684 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.03■□□□□ 0.64
CYP3A4P08684 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.03■□□□□ 0.64
CYP3A4P08684 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CYP3A4P08684 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.03■□□□□ 0.64
CYP3A4P08684 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 AL391256.1-201ENST00000443260 1855 ntBASIC19.03■□□□□ 0.64
CYP3A4P08684 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP3A4P08684 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CYP3A4P08684 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.02■□□□□ 0.64
CYP3A4P08684 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.02■□□□□ 0.64
CYP3A4P08684 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.02■□□□□ 0.64
CYP3A4P08684 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CYP3A4P08684 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.02■□□□□ 0.64
CYP3A4P08684 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
CYP3A4P08684 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CYP3A4P08684 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.02■□□□□ 0.64
CYP3A4P08684 AC106820.2-201ENST00000563775 3264 ntBASIC19.02■□□□□ 0.64
CYP3A4P08684 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CYP3A4P08684 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CYP3A4P08684 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CYP3A4P08684 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CYP3A4P08684 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CYP3A4P08684 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
CYP3A4P08684 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.02■□□□□ 0.64
CYP3A4P08684 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CYP3A4P08684 ADH5P3-201ENST00000433842 1137 ntBASIC19.02■□□□□ 0.64
CYP3A4P08684 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.02■□□□□ 0.64
CYP3A4P08684 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.02■□□□□ 0.64
CYP3A4P08684 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.02■□□□□ 0.64
CYP3A4P08684 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
CYP3A4P08684 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.02■□□□□ 0.64
CYP3A4P08684 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.02■□□□□ 0.64
CYP3A4P08684 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.02■□□□□ 0.64
CYP3A4P08684 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CYP3A4P08684 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CYP3A4P08684 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CYP3A4P08684 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CYP3A4P08684 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CYP3A4P08684 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.02■□□□□ 0.64
CYP3A4P08684 AC105020.1-201ENST00000435356 2205 ntBASIC19.02■□□□□ 0.64
CYP3A4P08684 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CYP3A4P08684 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CYP3A4P08684 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CYP3A4P08684 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CYP3A4P08684 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CYP3A4P08684 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.02■□□□□ 0.63
CYP3A4P08684 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CYP3A4P08684 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CYP3A4P08684 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CYP3A4P08684 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CYP3A4P08684 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CYP3A4P08684 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.02■□□□□ 0.63
CYP3A4P08684 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms