Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CAPN1P07384 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPN1P07384 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPN1P07384 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CAPN1P07384 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.81■□□□□ 0.28
CAPN1P07384 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 AC105020.1-201ENST00000435356 2205 ntBASIC16.81■□□□□ 0.28
CAPN1P07384 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CAPN1P07384 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
CAPN1P07384 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.81■□□□□ 0.28
CAPN1P07384 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.81■□□□□ 0.28
CAPN1P07384 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.81■□□□□ 0.28
CAPN1P07384 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.81■□□□□ 0.28
CAPN1P07384 HNRNPDP1-201ENST00000439535 754 ntBASIC16.81■□□□□ 0.28
CAPN1P07384 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.81■□□□□ 0.28
CAPN1P07384 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.81■□□□□ 0.28
CAPN1P07384 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.81■□□□□ 0.28
CAPN1P07384 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 AL049840.3-201ENST00000602669 611 ntBASIC16.81■□□□□ 0.28
CAPN1P07384 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.81■□□□□ 0.28
CAPN1P07384 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CAPN1P07384 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CAPN1P07384 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CAPN1P07384 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.81■□□□□ 0.28
CAPN1P07384 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN1P07384 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.8■□□□□ 0.28
CAPN1P07384 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN1P07384 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN1P07384 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN1P07384 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.8■□□□□ 0.28
CAPN1P07384 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.8■□□□□ 0.28
CAPN1P07384 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN1P07384 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CAPN1P07384 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN1P07384 AC243591.1-201ENST00000452967 1364 ntBASIC16.8■□□□□ 0.28
CAPN1P07384 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN1P07384 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CAPN1P07384 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN1P07384 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN1P07384 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.8■□□□□ 0.28
CAPN1P07384 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.8■□□□□ 0.28
CAPN1P07384 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.8■□□□□ 0.28
CAPN1P07384 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.8■□□□□ 0.28
CAPN1P07384 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.8■□□□□ 0.28
CAPN1P07384 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.8■□□□□ 0.28
CAPN1P07384 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.8■□□□□ 0.28
CAPN1P07384 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN1P07384 MIR7706-201ENST00000613747 67 ntBASIC16.8■□□□□ 0.28
CAPN1P07384 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.8■□□□□ 0.28
CAPN1P07384 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN1P07384 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN1P07384 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.8■□□□□ 0.28
CAPN1P07384 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.8■□□□□ 0.28
CAPN1P07384 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN1P07384 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.8■□□□□ 0.28
CAPN1P07384 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.8■□□□□ 0.28
CAPN1P07384 AL353593.2-201ENST00000602529 1483 ntBASIC16.8■□□□□ 0.28
CAPN1P07384 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.79■□□□□ 0.28
CAPN1P07384 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CAPN1P07384 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.79■□□□□ 0.28
CAPN1P07384 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CAPN1P07384 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.79■□□□□ 0.28
CAPN1P07384 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.79■□□□□ 0.28
CAPN1P07384 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CAPN1P07384 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.79■□□□□ 0.28
CAPN1P07384 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.79■□□□□ 0.28
CAPN1P07384 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CAPN1P07384 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms