Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.35■□□□□ 0.21
GFRA3O60609 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
GFRA3O60609 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.35■□□□□ 0.21
GFRA3O60609 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GFRA3O60609 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.35■□□□□ 0.21
GFRA3O60609 MIR5572-201ENST00000583188 137 ntBASIC16.35■□□□□ 0.21
GFRA3O60609 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GFRA3O60609 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.35■□□□□ 0.21
GFRA3O60609 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GFRA3O60609 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.35■□□□□ 0.21
GFRA3O60609 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GFRA3O60609 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GFRA3O60609 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GFRA3O60609 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GFRA3O60609 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
GFRA3O60609 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.35■□□□□ 0.21
GFRA3O60609 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.35■□□□□ 0.21
GFRA3O60609 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GFRA3O60609 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA3O60609 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA3O60609 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
GFRA3O60609 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA3O60609 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.34■□□□□ 0.21
GFRA3O60609 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
GFRA3O60609 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
GFRA3O60609 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA3O60609 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA3O60609 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA3O60609 YBX1P6-201ENST00000442962 1002 ntBASIC16.34■□□□□ 0.21
GFRA3O60609 SERBP1P3-201ENST00000459980 809 ntBASIC16.34■□□□□ 0.21
GFRA3O60609 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.34■□□□□ 0.21
GFRA3O60609 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.34■□□□□ 0.21
GFRA3O60609 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC16.34■□□□□ 0.21
GFRA3O60609 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.34■□□□□ 0.21
GFRA3O60609 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
GFRA3O60609 SPCS2P2-201ENST00000603270 608 ntBASIC16.34■□□□□ 0.21
GFRA3O60609 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.34■□□□□ 0.21
GFRA3O60609 AL022328.1-201ENST00000610050 478 ntBASIC16.34■□□□□ 0.21
GFRA3O60609 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA3O60609 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.34■□□□□ 0.21
GFRA3O60609 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA3O60609 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA3O60609 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.34■□□□□ 0.21
GFRA3O60609 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA3O60609 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA3O60609 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.34■□□□□ 0.21
GFRA3O60609 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.34■□□□□ 0.21
GFRA3O60609 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA3O60609 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA3O60609 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GFRA3O60609 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
GFRA3O60609 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.33■□□□□ 0.21
GFRA3O60609 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.33■□□□□ 0.21
GFRA3O60609 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GFRA3O60609 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
GFRA3O60609 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
GFRA3O60609 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.33■□□□□ 0.21
GFRA3O60609 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
GFRA3O60609 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA3O60609 AL049812.1-201ENST00000432563 2267 ntBASIC16.33■□□□□ 0.2
GFRA3O60609 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA3O60609 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA3O60609 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA3O60609 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA3O60609 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA3O60609 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA3O60609 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA3O60609 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA3O60609 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA3O60609 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.33■□□□□ 0.2
GFRA3O60609 UPF3AP2-201ENST00000457924 1132 ntBASIC16.33■□□□□ 0.2
GFRA3O60609 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA3O60609 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA3O60609 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA3O60609 BANF1P1-201ENST00000553684 263 ntBASIC16.33■□□□□ 0.2
GFRA3O60609 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.33■□□□□ 0.2
GFRA3O60609 AC105129.2-201ENST00000559536 390 ntBASIC16.33■□□□□ 0.2
GFRA3O60609 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA3O60609 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC16.33■□□□□ 0.2
GFRA3O60609 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA3O60609 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.33■□□□□ 0.2
GFRA3O60609 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA3O60609 AL022328.3-201ENST00000607943 679 ntBASIC16.33■□□□□ 0.2
GFRA3O60609 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.33■□□□□ 0.2
GFRA3O60609 AC004461.2-201ENST00000629517 803 ntBASIC16.33■□□□□ 0.2
GFRA3O60609 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
GFRA3O60609 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
GFRA3O60609 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA3O60609 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
GFRA3O60609 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA3O60609 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA3O60609 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA3O60609 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA3O60609 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA3O60609 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA3O60609 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
GFRA3O60609 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA3O60609 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.32■□□□□ 0.2
GFRA3O60609 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA3O60609 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms