Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 CSF2RBP1-201ENST00000447905 391 ntBASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 SDHAP3-202ENST00000515467 728 ntBASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 RNA5SP410-201ENST00000516285 106 ntBASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 AC243960.2-201ENST00000600996 747 ntBASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 AC006538.1-201ENST00000567905 1585 ntBASIC19.52■□□□□ 0.71
TMEM88BA6NKF7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.52■□□□□ 0.71
TMEM88BA6NKF7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
TMEM88BA6NKF7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM88BA6NKF7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.71
TMEM88BA6NKF7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM88BA6NKF7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM88BA6NKF7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.52■□□□□ 0.71
TMEM88BA6NKF7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 LINC00895-201ENST00000629028 1637 ntBASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 REXO1L11P-201ENST00000620964 1927 ntBASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TMEM88BA6NKF7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 AL589987.1-201ENST00000453380 819 ntBASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 AC098859.1-201ENST00000502915 1238 ntBASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 RRP7BP-205ENST00000566851 833 ntBASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 AC106872.11-201ENST00000605838 421 ntBASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88BA6NKF7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 AC005229.1-201ENST00000392885 409 ntBASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms