Protein–RNA interactions for Protein: Q9Y5G5

PCDHGA8, Protocadherin gamma-A8, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8Q9Y5G5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 VN2R19P-201ENST00000442399 1052 ntBASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 RFPL4AP1-201ENST00000530883 850 ntBASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 UBALD1-205ENST00000590891 2641 ntBASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA8Q9Y5G5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 ELK2BP-201ENST00000415014 1224 ntBASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 CYMP-203ENST00000474680 1263 ntBASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 MIR3197-201ENST00000582241 73 ntBASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 AL353593.2-201ENST00000602529 1483 ntBASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGA8Q9Y5G5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 NCF1C-201ENST00000438382 1427 ntBASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 AL513477.1-201ENST00000602865 2407 ntBASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHGA8Q9Y5G5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA8Q9Y5G5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGA8Q9Y5G5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA8Q9Y5G5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PCDHGA8Q9Y5G5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA8Q9Y5G5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA8Q9Y5G5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA8Q9Y5G5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
PCDHGA8Q9Y5G5 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA8Q9Y5G5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGA8Q9Y5G5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGA8Q9Y5G5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA8Q9Y5G5 HCG4B-203ENST00000450128 991 ntBASIC16.76■□□□□ 0.27
PCDHGA8Q9Y5G5 AC108073.2-201ENST00000464002 357 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms