Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 AC003669.1-201ENST00000334569 611 ntBASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 MRPL20P1-201ENST00000400819 433 ntBASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.94■■□□□ 1.1
PDZRN3Q9UPQ7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 SPCS2P1-201ENST00000561636 679 ntBASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 GGTLC5P-201ENST00000617623 998 ntBASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDZRN3Q9UPQ7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 AL031432.2-201ENST00000566714 459 ntBASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 AL928711.1-201ENST00000570165 459 ntBASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms