Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 AC104596.2-201ENST00000512793 793 ntBASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 MIR4750-201ENST00000584564 56 ntBASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 KLK3-211ENST00000597483 810 ntTSL 2 BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 HLA-C-210ENST00000640219 976 ntBASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 MGST3-203ENST00000367885 680 ntTSL 2 BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 CDK2AP2P3-201ENST00000422476 372 ntBASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 SUOX-214ENST00000551841 906 ntTSL 3 BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC26.53■■□□□ 1.84
RIMBP3Q9UFD9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RIMBP3Q9UFD9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC26.52■■□□□ 1.84
RIMBP3Q9UFD9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RIMBP3Q9UFD9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
RIMBP3Q9UFD9 AL096828.2-201ENST00000567259 1965 ntBASIC26.52■■□□□ 1.84
RIMBP3Q9UFD9 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RIMBP3Q9UFD9 AL442647.2-201ENST00000429864 857 ntBASIC26.52■■□□□ 1.84
RIMBP3Q9UFD9 AC091812.3-201ENST00000621362 345 ntBASIC26.52■■□□□ 1.84
RIMBP3Q9UFD9 RHOXF1P1-202ENST00000635473 501 ntBASIC26.52■■□□□ 1.84
RIMBP3Q9UFD9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC26.52■■□□□ 1.84
RIMBP3Q9UFD9 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC26.52■■□□□ 1.84
RIMBP3Q9UFD9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.84
RIMBP3Q9UFD9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 BX284668.4-201ENST00000453917 508 ntBASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 FTLP10-202ENST00000505798 471 ntBASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RIMBP3Q9UFD9 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 AC131009.4-201ENST00000624048 1740 ntBASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
RIMBP3Q9UFD9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RIMBP3Q9UFD9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms