Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 MIR1199-201ENST00000621445 119 ntBASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 AC079776.2-201ENST00000641154 1609 ntBASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 PRYP5-201ENST00000451909 266 ntBASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 AC006557.2-201ENST00000592985 1240 ntBASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 AC073592.4-201ENST00000623827 446 ntBASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NCKIPSDQ9NZQ3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NCKIPSDQ9NZQ3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NCKIPSDQ9NZQ3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCKIPSDQ9NZQ3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCKIPSDQ9NZQ3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCKIPSDQ9NZQ3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCKIPSDQ9NZQ3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.27■□□□□ 0.35
NCKIPSDQ9NZQ3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NCKIPSDQ9NZQ3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCKIPSDQ9NZQ3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 RNA5SP415-201ENST00000517246 115 ntBASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 AC034105.1-201ENST00000563488 319 ntBASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 AL118508.1-201ENST00000613502 2345 ntBASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 AC116353.5-201ENST00000638148 1699 ntBASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCKIPSDQ9NZQ3 AC106886.4-201ENST00000623557 2502 ntBASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 PMPCAP1-201ENST00000508114 1576 ntBASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCKIPSDQ9NZQ3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms