Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CCL13Q99616 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL13Q99616 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL13Q99616 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCL13Q99616 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCL13Q99616 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCL13Q99616 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
CCL13Q99616 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL13Q99616 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL13Q99616 AP002414.1-201ENST00000391405 1147 ntBASIC14.29□□□□□ -0.12
CCL13Q99616 AL590627.1-203ENST00000421194 1026 ntBASIC14.29□□□□□ -0.12
CCL13Q99616 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCL13Q99616 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.29□□□□□ -0.12
CCL13Q99616 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL13Q99616 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.29□□□□□ -0.12
CCL13Q99616 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.29□□□□□ -0.12
CCL13Q99616 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.29□□□□□ -0.12
CCL13Q99616 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL13Q99616 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCL13Q99616 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCL13Q99616 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.29□□□□□ -0.12
CCL13Q99616 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL13Q99616 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL13Q99616 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CCL13Q99616 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL13Q99616 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCL13Q99616 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL13Q99616 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCL13Q99616 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL13Q99616 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL13Q99616 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL13Q99616 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CCL13Q99616 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL13Q99616 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
CCL13Q99616 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL13Q99616 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CCL13Q99616 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
CCL13Q99616 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL13Q99616 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 FRMD8P1-201ENST00000440433 1524 ntBASIC14.28□□□□□ -0.12
CCL13Q99616 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL13Q99616 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.28□□□□□ -0.12
CCL13Q99616 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCL13Q99616 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.28□□□□□ -0.12
CCL13Q99616 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCL13Q99616 AC080080.1-201ENST00000625121 2420 ntBASIC14.28□□□□□ -0.12
CCL13Q99616 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CCL13Q99616 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL13Q99616 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCL13Q99616 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL13Q99616 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL13Q99616 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCL13Q99616 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms