Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 AC012569.1-201ENST00000591191 1524 ntBASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 PCDHB18P-201ENST00000524813 2368 ntBASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 DUX4L17-201ENST00000557360 1267 ntBASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 AC106820.2-201ENST00000563775 3264 ntBASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP1Q96SZ6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 HTR5BP-201ENST00000430851 1154 ntBASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 YBX1P5-201ENST00000509441 847 ntBASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 AC112191.1-201ENST00000523689 701 ntBASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP1Q96SZ6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 AC002056.1-201ENST00000395613 760 ntBASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms