Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 AL603756.1-201ENST00000606511 2163 ntBASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 AC006504.4-201ENST00000592118 1568 ntBASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 HLA-A-202ENST00000376806 1854 ntBASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.63■□□□□ 0.25
PDLIM5Q96HC4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 AC073621.1-201ENST00000392730 636 ntBASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 AC087163.2-201ENST00000457299 853 ntBASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 REXO1L3P-201ENST00000622202 1288 ntBASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 AL139384.1-201ENST00000612143 3047 ntBASIC16.62■□□□□ 0.25
PDLIM5Q96HC4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 AC006538.1-201ENST00000567905 1585 ntBASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 RNPS1P1-201ENST00000507437 918 ntBASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.61■□□□□ 0.25
PDLIM5Q96HC4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms