Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC092474.2-201ENST00000424288 719 ntBASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 CNN2P11-201ENST00000429351 262 ntBASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 SNHG9-202ENST00000564014 471 ntBASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 CYP2A7P1-201ENST00000595391 815 ntBASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 AP001350.2-201ENST00000625104 1094 ntBASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NEDD1Q8NHV4 AC005332.8-201ENST00000622750 2735 ntBASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 AL671277.1-201ENST00000429656 993 ntBASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 MIR3909-201ENST00000579518 119 ntBASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD1Q8NHV4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 AP000344.2-201ENST00000512987 629 ntBASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 AC013467.2-201ENST00000605472 835 ntBASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 AL031055.1-201ENST00000606362 631 ntBASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NEDD1Q8NHV4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms