Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 LINC01711-201ENST00000598340 967 ntBASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 LINC02012-201ENST00000608206 1725 ntBASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 AC092068.3-201ENST00000587894 2016 ntBASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 LINC00982-205ENST00000420957 435 ntBASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 MTDHP4-201ENST00000600287 670 ntBASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 AC025062.2-201ENST00000605477 670 ntBASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 AL031008.1-201ENST00000619963 541 ntBASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 AL139288.1-201ENST00000623748 933 ntBASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIMC1Q8NDZ2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 PRYP5-201ENST00000451909 266 ntBASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 AC148477.8-201ENST00000624298 468 ntBASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 AL022326.1-202ENST00000641533 845 ntBASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIMC1Q8NDZ2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms