Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 CNN2P2-201ENST00000443536 909 ntBASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 CNN2P3-201ENST00000450201 906 ntBASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 KLF2P3-201ENST00000451977 1087 ntBASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 DUX4L27-201ENST00000554796 1261 ntBASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 AL136317.3-201ENST00000618497 906 ntBASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 AC107890.1-201ENST00000422478 521 ntBASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 AL512356.2-201ENST00000546955 174 ntBASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAI1Q7Z5J4 SLC22A20-204ENST00000530038 1673 ntBASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 AC055876.3-201ENST00000431496 288 ntBASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 AC138649.4-201ENST00000612222 287 ntBASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 AL353732.1-201ENST00000569618 1459 ntBASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
RAI1Q7Z5J4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 AC236430.1-201ENST00000402231 743 ntBASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 AC002472.2-201ENST00000442739 958 ntBASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 AC016396.2-201ENST00000562575 1417 ntBASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms