Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-5P52952 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX2-5P52952 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.52□□□□□ -0.09
NKX2-5P52952 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NKX2-5P52952 MIR149-201ENST00000384879 89 ntBASIC14.52□□□□□ -0.09
NKX2-5P52952 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.52□□□□□ -0.09
NKX2-5P52952 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.52□□□□□ -0.09
NKX2-5P52952 TERF1P2-201ENST00000583350 1212 ntBASIC14.52□□□□□ -0.09
NKX2-5P52952 AC005181.1-201ENST00000604782 1256 ntBASIC14.52□□□□□ -0.09
NKX2-5P52952 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX2-5P52952 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
NKX2-5P52952 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
NKX2-5P52952 CICP23-201ENST00000605013 2741 ntBASIC14.52□□□□□ -0.09
NKX2-5P52952 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
NKX2-5P52952 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
NKX2-5P52952 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.52□□□□□ -0.09
NKX2-5P52952 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX2-5P52952 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
NKX2-5P52952 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-5P52952 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-5P52952 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX2-5P52952 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
NKX2-5P52952 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.51□□□□□ -0.09
NKX2-5P52952 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.51□□□□□ -0.09
NKX2-5P52952 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX2-5P52952 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.51□□□□□ -0.09
NKX2-5P52952 AC007322.4-201ENST00000509611 723 ntBASIC14.51□□□□□ -0.09
NKX2-5P52952 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
NKX2-5P52952 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX2-5P52952 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NKX2-5P52952 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NKX2-5P52952 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-5P52952 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-5P52952 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-5P52952 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-5P52952 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-5P52952 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-5P52952 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-5P52952 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX2-5P52952 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NKX2-5P52952 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
NKX2-5P52952 AC004854.2-201ENST00000608450 1441 ntBASIC14.5□□□□□ -0.09
NKX2-5P52952 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-5P52952 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-5P52952 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX2-5P52952 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-5P52952 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NKX2-5P52952 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-5P52952 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-5P52952 AL359183.1-201ENST00000623796 2132 ntBASIC14.5□□□□□ -0.09
NKX2-5P52952 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX2-5P52952 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-5P52952 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX2-5P52952 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-5P52952 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX2-5P52952 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
NKX2-5P52952 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NKX2-5P52952 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX2-5P52952 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-5P52952 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NKX2-5P52952 AC096631.2-201ENST00000436136 790 ntBASIC14.5□□□□□ -0.09
NKX2-5P52952 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-5P52952 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.5□□□□□ -0.09
NKX2-5P52952 AL121906.2-201ENST00000621597 723 ntBASIC14.5□□□□□ -0.09
NKX2-5P52952 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-5P52952 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-5P52952 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NKX2-5P52952 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NKX2-5P52952 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms