Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.4□□□□□ -0.1
COL8A2P25067 AC087163.2-201ENST00000457299 853 ntBASIC14.4□□□□□ -0.1
COL8A2P25067 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.4□□□□□ -0.1
COL8A2P25067 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.4□□□□□ -0.1
COL8A2P25067 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.4□□□□□ -0.1
COL8A2P25067 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 AC023141.13-201ENST00000604991 943 ntBASIC14.4□□□□□ -0.1
COL8A2P25067 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.4□□□□□ -0.1
COL8A2P25067 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.4□□□□□ -0.1
COL8A2P25067 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.4□□□□□ -0.1
COL8A2P25067 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
COL8A2P25067 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.39□□□□□ -0.11
COL8A2P25067 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.39□□□□□ -0.11
COL8A2P25067 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.39□□□□□ -0.11
COL8A2P25067 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
COL8A2P25067 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
COL8A2P25067 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.39□□□□□ -0.11
COL8A2P25067 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
COL8A2P25067 AC084018.2-201ENST00000613093 2607 ntBASIC14.39□□□□□ -0.11
COL8A2P25067 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
COL8A2P25067 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
COL8A2P25067 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.39□□□□□ -0.11
COL8A2P25067 AC074386.1-202ENST00000463561 864 ntBASIC14.39□□□□□ -0.11
COL8A2P25067 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.39□□□□□ -0.11
COL8A2P25067 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.39□□□□□ -0.11
COL8A2P25067 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.39□□□□□ -0.11
COL8A2P25067 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.39□□□□□ -0.11
COL8A2P25067 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.39□□□□□ -0.11
COL8A2P25067 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 AC134684.3-201ENST00000641758 218 ntBASIC14.39□□□□□ -0.11
COL8A2P25067 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
COL8A2P25067 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
COL8A2P25067 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.39□□□□□ -0.11
COL8A2P25067 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 AC020916.1-201ENST00000587762 1774 ntBASIC14.39□□□□□ -0.11
COL8A2P25067 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COL8A2P25067 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.39□□□□□ -0.11
COL8A2P25067 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL8A2P25067 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
COL8A2P25067 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL8A2P25067 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.38□□□□□ -0.11
COL8A2P25067 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.38□□□□□ -0.11
COL8A2P25067 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COL8A2P25067 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.38□□□□□ -0.11
COL8A2P25067 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.38□□□□□ -0.11
COL8A2P25067 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL8A2P25067 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.38□□□□□ -0.11
COL8A2P25067 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL8A2P25067 TNRC18P3-201ENST00000441896 2691 ntBASIC14.38□□□□□ -0.11
COL8A2P25067 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL8A2P25067 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COL8A2P25067 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL8A2P25067 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
COL8A2P25067 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL8A2P25067 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.38□□□□□ -0.11
COL8A2P25067 AC211486.1-202ENST00000416371 468 ntBASIC14.38□□□□□ -0.11
COL8A2P25067 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.38□□□□□ -0.11
COL8A2P25067 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.38□□□□□ -0.11
COL8A2P25067 AL513480.1-201ENST00000451731 511 ntBASIC14.38□□□□□ -0.11
COL8A2P25067 ALG1L5P-201ENST00000482043 771 ntBASIC14.38□□□□□ -0.11
COL8A2P25067 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.38□□□□□ -0.11
COL8A2P25067 AC211476.1-201ENST00000503899 468 ntBASIC14.38□□□□□ -0.11
COL8A2P25067 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.38□□□□□ -0.11
COL8A2P25067 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.38□□□□□ -0.11
COL8A2P25067 PDPK2P-202ENST00000562415 1191 ntBASIC14.38□□□□□ -0.11
COL8A2P25067 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
COL8A2P25067 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
COL8A2P25067 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
COL8A2P25067 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.38□□□□□ -0.11
COL8A2P25067 C20orf181-201ENST00000623918 480 ntBASIC14.38□□□□□ -0.11
COL8A2P25067 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL8A2P25067 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
COL8A2P25067 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.38□□□□□ -0.11
COL8A2P25067 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL8A2P25067 AC016396.2-201ENST00000562575 1417 ntBASIC14.38□□□□□ -0.11
COL8A2P25067 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL8A2P25067 AC141586.5-201ENST00000624546 2050 ntBASIC14.38□□□□□ -0.11
COL8A2P25067 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COL8A2P25067 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL8A2P25067 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms