Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
BMP3P12645 SPDYE9P-201ENST00000570642 692 ntBASIC19.58■□□□□ 0.72
BMP3P12645 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BMP3P12645 SPDYE10P-202ENST00000612005 668 ntBASIC19.58■□□□□ 0.72
BMP3P12645 SPDYE8P-202ENST00000612377 668 ntBASIC19.58■□□□□ 0.72
BMP3P12645 AL161645.1-201ENST00000622716 1255 ntBASIC19.58■□□□□ 0.72
BMP3P12645 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.58■□□□□ 0.72
BMP3P12645 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
BMP3P12645 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.58■□□□□ 0.72
BMP3P12645 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BMP3P12645 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
BMP3P12645 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BMP3P12645 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
BMP3P12645 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.58■□□□□ 0.72
BMP3P12645 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
BMP3P12645 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BMP3P12645 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BMP3P12645 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BMP3P12645 AC131009.4-201ENST00000624048 1740 ntBASIC19.57■□□□□ 0.72
BMP3P12645 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BMP3P12645 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.57■□□□□ 0.72
BMP3P12645 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BMP3P12645 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
BMP3P12645 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BMP3P12645 AL139400.1-201ENST00000366220 510 ntBASIC19.57■□□□□ 0.72
BMP3P12645 TFAMP1-201ENST00000412727 736 ntBASIC19.57■□□□□ 0.72
BMP3P12645 TSEN15P1-201ENST00000423257 515 ntBASIC19.57■□□□□ 0.72
BMP3P12645 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
BMP3P12645 AC109635.5-201ENST00000533593 962 ntBASIC19.57■□□□□ 0.72
BMP3P12645 AC124947.2-201ENST00000547118 1133 ntBASIC19.57■□□□□ 0.72
BMP3P12645 RARRES2P8-201ENST00000566335 367 ntBASIC19.57■□□□□ 0.72
BMP3P12645 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.57■□□□□ 0.72
BMP3P12645 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.57■□□□□ 0.72
BMP3P12645 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.57■□□□□ 0.72
BMP3P12645 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BMP3P12645 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BMP3P12645 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BMP3P12645 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BMP3P12645 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
BMP3P12645 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BMP3P12645 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BMP3P12645 AC090340.1-201ENST00000620778 4980 ntBASIC19.56■□□□□ 0.72
BMP3P12645 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.56■□□□□ 0.72
BMP3P12645 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BMP3P12645 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BMP3P12645 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
BMP3P12645 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BMP3P12645 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
BMP3P12645 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BMP3P12645 RNU1-129P-201ENST00000384064 167 ntBASIC19.56■□□□□ 0.72
BMP3P12645 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.56■□□□□ 0.72
BMP3P12645 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.56■□□□□ 0.72
BMP3P12645 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.56■□□□□ 0.72
BMP3P12645 AC092474.2-201ENST00000424288 719 ntBASIC19.56■□□□□ 0.72
BMP3P12645 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.56■□□□□ 0.72
BMP3P12645 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.56■□□□□ 0.72
BMP3P12645 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.56■□□□□ 0.72
BMP3P12645 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
BMP3P12645 U1.21-201ENST00000580816 167 ntBASIC19.56■□□□□ 0.72
BMP3P12645 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.56■□□□□ 0.72
BMP3P12645 AP001350.2-201ENST00000625104 1094 ntBASIC19.56■□□□□ 0.72
BMP3P12645 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.56■□□□□ 0.72
BMP3P12645 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.56■□□□□ 0.72
BMP3P12645 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BMP3P12645 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BMP3P12645 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BMP3P12645 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.56■□□□□ 0.72
BMP3P12645 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BMP3P12645 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.56■□□□□ 0.72
BMP3P12645 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BMP3P12645 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BMP3P12645 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.56■□□□□ 0.72
BMP3P12645 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
BMP3P12645 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.55■□□□□ 0.72
BMP3P12645 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.55■□□□□ 0.72
BMP3P12645 AKAP8P1-201ENST00000434743 1349 ntBASIC19.55■□□□□ 0.72
BMP3P12645 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP3P12645 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.55■□□□□ 0.72
BMP3P12645 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.55■□□□□ 0.72
BMP3P12645 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP3P12645 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.55■□□□□ 0.72
BMP3P12645 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP3P12645 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BMP3P12645 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BMP3P12645 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP3P12645 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP3P12645 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP3P12645 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.55■□□□□ 0.72
BMP3P12645 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BMP3P12645 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.55■□□□□ 0.72
BMP3P12645 RN7SL589P-201ENST00000481268 310 ntBASIC19.55■□□□□ 0.72
BMP3P12645 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.55■□□□□ 0.72
BMP3P12645 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.55■□□□□ 0.72
BMP3P12645 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.55■□□□□ 0.72
BMP3P12645 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
BMP3P12645 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.55■□□□□ 0.72
BMP3P12645 AC243562.1-201ENST00000560672 389 ntBASIC19.55■□□□□ 0.72
BMP3P12645 AL135744.1-201ENST00000565098 629 ntBASIC19.55■□□□□ 0.72
BMP3P12645 AL355385.1-201ENST00000606123 409 ntBASIC19.55■□□□□ 0.72
BMP3P12645 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms