Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 AL355385.1-201ENST00000606123 409 ntBASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40ALP0C0E4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 AC012313.1-201ENST00000593393 3059 ntBASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 AP002472.1-201ENST00000577490 586 ntBASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 REXO1L3P-201ENST00000622202 1288 ntBASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 AC092902.6-201ENST00000641783 218 ntBASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAB40ALP0C0E4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 LYSMD4-203ENST00000378904 2122 ntBASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 AC112191.1-201ENST00000523689 701 ntBASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 AL645728.2-201ENST00000641974 660 ntBASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAB40ALP0C0E4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms