Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.19■□□□□ 0.34
RETP07949 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.19■□□□□ 0.34
RETP07949 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.19■□□□□ 0.34
RETP07949 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
RETP07949 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 FAM185BP-201ENST00000443595 716 ntBASIC17.19■□□□□ 0.34
RETP07949 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.19■□□□□ 0.34
RETP07949 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.19■□□□□ 0.34
RETP07949 AC069335.1-201ENST00000489972 472 ntBASIC17.19■□□□□ 0.34
RETP07949 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.19■□□□□ 0.34
RETP07949 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.19■□□□□ 0.34
RETP07949 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RETP07949 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 AL359881.2-201ENST00000602973 570 ntBASIC17.19■□□□□ 0.34
RETP07949 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.19■□□□□ 0.34
RETP07949 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.19■□□□□ 0.34
RETP07949 AL358472.5-202ENST00000641448 1267 ntBASIC17.19■□□□□ 0.34
RETP07949 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
RETP07949 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RETP07949 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.19■□□□□ 0.34
RETP07949 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RETP07949 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.19■□□□□ 0.34
RETP07949 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RETP07949 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 TUBB3P1-201ENST00000405796 1332 ntBASIC17.19■□□□□ 0.34
RETP07949 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.19■□□□□ 0.34
RETP07949 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 AC092919.2-201ENST00000623631 1645 ntBASIC17.18■□□□□ 0.34
RETP07949 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.18■□□□□ 0.34
RETP07949 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.18■□□□□ 0.34
RETP07949 MIR661-201ENST00000384842 89 ntBASIC17.18■□□□□ 0.34
RETP07949 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.18■□□□□ 0.34
RETP07949 HLA-V-201ENST00000429037 534 ntBASIC17.18■□□□□ 0.34
RETP07949 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.18■□□□□ 0.34
RETP07949 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.18■□□□□ 0.34
RETP07949 KLF2P3-201ENST00000451977 1087 ntBASIC17.18■□□□□ 0.34
RETP07949 STK19B-204ENST00000512515 211 ntBASIC17.18■□□□□ 0.34
RETP07949 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.18■□□□□ 0.34
RETP07949 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.18■□□□□ 0.34
RETP07949 LINC02560-201ENST00000596379 459 ntBASIC17.18■□□□□ 0.34
RETP07949 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.18■□□□□ 0.34
RETP07949 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.18■□□□□ 0.34
RETP07949 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.18■□□□□ 0.34
RETP07949 AC008761.3-201ENST00000624803 892 ntBASIC17.18■□□□□ 0.34
RETP07949 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.18■□□□□ 0.34
RETP07949 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 AC009053.2-201ENST00000563701 2365 ntBASIC17.18■□□□□ 0.34
RETP07949 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.18■□□□□ 0.34
RETP07949 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.18■□□□□ 0.34
RETP07949 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RETP07949 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RETP07949 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RETP07949 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.17■□□□□ 0.34
RETP07949 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.17■□□□□ 0.34
RETP07949 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RETP07949 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 OR8S1-201ENST00000310194 1080 ntBASIC17.17■□□□□ 0.34
RETP07949 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RETP07949 LINC00982-205ENST00000420957 435 ntBASIC17.17■□□□□ 0.34
RETP07949 AL671277.1-201ENST00000429656 993 ntBASIC17.17■□□□□ 0.34
RETP07949 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms