Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TCRAP04437 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TCRAP04437 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TCRAP04437 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.02□□□□□ -0.32
TCRAP04437 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.02□□□□□ -0.32
TCRAP04437 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TCRAP04437 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
TCRAP04437 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.02□□□□□ -0.32
TCRAP04437 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TCRAP04437 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TCRAP04437 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.02□□□□□ -0.32
TCRAP04437 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.02□□□□□ -0.32
TCRAP04437 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TCRAP04437 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TCRAP04437 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.02□□□□□ -0.33
TCRAP04437 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.02□□□□□ -0.33
TCRAP04437 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TCRAP04437 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TCRAP04437 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.02□□□□□ -0.33
TCRAP04437 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TCRAP04437 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TCRAP04437 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TCRAP04437 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.02□□□□□ -0.33
TCRAP04437 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.02□□□□□ -0.33
TCRAP04437 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.02□□□□□ -0.33
TCRAP04437 AL138966.2-201ENST00000621997 464 ntBASIC13.02□□□□□ -0.33
TCRAP04437 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.02□□□□□ -0.33
TCRAP04437 TUBB8P12-201ENST00000308911 1335 ntBASIC13.02□□□□□ -0.33
TCRAP04437 TUBB7P-202ENST00000428444 1305 ntBASIC13.02□□□□□ -0.33
TCRAP04437 TUBB8P7-204ENST00000567960 1332 ntBASIC13.02□□□□□ -0.33
TCRAP04437 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 AC105917.1-201ENST00000506637 2539 ntBASIC13.02□□□□□ -0.33
TCRAP04437 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TCRAP04437 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.02□□□□□ -0.33
TCRAP04437 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TCRAP04437 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TCRAP04437 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.02□□□□□ -0.33
TCRAP04437 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.02□□□□□ -0.33
TCRAP04437 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRAP04437 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.01□□□□□ -0.33
TCRAP04437 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TCRAP04437 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.01□□□□□ -0.33
TCRAP04437 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.01□□□□□ -0.33
TCRAP04437 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.01□□□□□ -0.33
TCRAP04437 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.01□□□□□ -0.33
TCRAP04437 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.01□□□□□ -0.33
TCRAP04437 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.01□□□□□ -0.33
TCRAP04437 AL031432.5-201ENST00000641059 760 ntBASIC13.01□□□□□ -0.33
TCRAP04437 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TCRAP04437 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.01□□□□□ -0.33
TCRAP04437 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TCRAP04437 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.01□□□□□ -0.33
TCRAP04437 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TCRAP04437 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TCRAP04437 AL645728.1-201ENST00000366221 2101 ntBASIC13.01□□□□□ -0.33
TCRAP04437 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
TCRAP04437 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.01□□□□□ -0.33
TCRAP04437 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.01□□□□□ -0.33
TCRAP04437 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRAP04437 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
TCRAP04437 FLJ16779-201ENST00000612722 7638 ntBASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms