Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFP01375 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFP01375 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFP01375 AC004461.1-201ENST00000412461 403 ntBASIC16.59■□□□□ 0.25
TNFP01375 SPDYE11-202ENST00000450699 704 ntBASIC16.59■□□□□ 0.25
TNFP01375 TIMM8BP1-201ENST00000452384 211 ntBASIC16.59■□□□□ 0.25
TNFP01375 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFP01375 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.59■□□□□ 0.25
TNFP01375 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFP01375 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
TNFP01375 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFP01375 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFP01375 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TNFP01375 SPDYE9P-201ENST00000570642 692 ntBASIC16.59■□□□□ 0.25
TNFP01375 AC091167.2-201ENST00000579581 588 ntBASIC16.59■□□□□ 0.25
TNFP01375 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.59■□□□□ 0.25
TNFP01375 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.59■□□□□ 0.25
TNFP01375 SPDYE10P-202ENST00000612005 668 ntBASIC16.59■□□□□ 0.25
TNFP01375 SPDYE8P-202ENST00000612377 668 ntBASIC16.59■□□□□ 0.25
TNFP01375 AL161645.1-201ENST00000622716 1255 ntBASIC16.59■□□□□ 0.25
TNFP01375 AP001350.2-201ENST00000625104 1094 ntBASIC16.59■□□□□ 0.25
TNFP01375 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFP01375 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFP01375 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
TNFP01375 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFP01375 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFP01375 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFP01375 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.59■□□□□ 0.25
TNFP01375 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFP01375 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFP01375 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFP01375 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFP01375 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFP01375 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFP01375 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFP01375 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TNFP01375 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TNFP01375 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.58■□□□□ 0.25
TNFP01375 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.58■□□□□ 0.25
TNFP01375 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TNFP01375 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFP01375 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFP01375 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TNFP01375 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.58■□□□□ 0.24
TNFP01375 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TNFP01375 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.58■□□□□ 0.24
TNFP01375 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.58■□□□□ 0.24
TNFP01375 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TNFP01375 AC022145.2-201ENST00000598203 171 ntBASIC16.58■□□□□ 0.24
TNFP01375 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.58■□□□□ 0.24
TNFP01375 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.58■□□□□ 0.24
TNFP01375 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TNFP01375 FRMD8P1-201ENST00000440433 1524 ntBASIC16.58■□□□□ 0.24
TNFP01375 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TNFP01375 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFP01375 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TNFP01375 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.57■□□□□ 0.24
TNFP01375 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TNFP01375 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TNFP01375 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TNFP01375 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TNFP01375 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.57■□□□□ 0.24
TNFP01375 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.57■□□□□ 0.24
TNFP01375 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 TFAMP1-201ENST00000412727 736 ntBASIC16.57■□□□□ 0.24
TNFP01375 AL355306.1-201ENST00000415580 579 ntBASIC16.57■□□□□ 0.24
TNFP01375 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.57■□□□□ 0.24
TNFP01375 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TNFP01375 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 AC099522.2-201ENST00000607001 744 ntBASIC16.57■□□□□ 0.24
TNFP01375 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.57■□□□□ 0.24
TNFP01375 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.57■□□□□ 0.24
TNFP01375 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFP01375 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms