Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.22■□□□□ 0.51
TIMP1P01033 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.22■□□□□ 0.51
TIMP1P01033 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.22■□□□□ 0.51
TIMP1P01033 RAB43P1-201ENST00000561790 589 ntBASIC18.22■□□□□ 0.51
TIMP1P01033 CHCHD2P3-201ENST00000603038 451 ntBASIC18.22■□□□□ 0.51
TIMP1P01033 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.22■□□□□ 0.51
TIMP1P01033 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.22■□□□□ 0.51
TIMP1P01033 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TIMP1P01033 SPTSSB-204ENST00000617024 1292 ntBASIC18.22■□□□□ 0.51
TIMP1P01033 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.22■□□□□ 0.51
TIMP1P01033 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.22■□□□□ 0.51
TIMP1P01033 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TIMP1P01033 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
TIMP1P01033 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TIMP1P01033 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TIMP1P01033 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.22■□□□□ 0.51
TIMP1P01033 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TIMP1P01033 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TIMP1P01033 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TIMP1P01033 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TIMP1P01033 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.22■□□□□ 0.51
TIMP1P01033 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.22■□□□□ 0.51
TIMP1P01033 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.22■□□□□ 0.51
TIMP1P01033 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TIMP1P01033 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.21■□□□□ 0.51
TIMP1P01033 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TIMP1P01033 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TIMP1P01033 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TIMP1P01033 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TIMP1P01033 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TIMP1P01033 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.21■□□□□ 0.51
TIMP1P01033 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TIMP1P01033 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TIMP1P01033 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.21■□□□□ 0.51
TIMP1P01033 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TIMP1P01033 AC105021.1-202ENST00000570572 669 ntBASIC18.21■□□□□ 0.51
TIMP1P01033 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TIMP1P01033 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.21■□□□□ 0.51
TIMP1P01033 AC008494.3-201ENST00000606615 944 ntBASIC18.21■□□□□ 0.51
TIMP1P01033 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TIMP1P01033 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.21■□□□□ 0.51
TIMP1P01033 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TIMP1P01033 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TIMP1P01033 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TIMP1P01033 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.21■□□□□ 0.51
TIMP1P01033 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TIMP1P01033 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
TIMP1P01033 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.21■□□□□ 0.51
TIMP1P01033 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.21■□□□□ 0.51
TIMP1P01033 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
TIMP1P01033 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
TIMP1P01033 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TIMP1P01033 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.2■□□□□ 0.5
TIMP1P01033 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP1P01033 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP1P01033 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.2■□□□□ 0.5
TIMP1P01033 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.2■□□□□ 0.5
TIMP1P01033 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP1P01033 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.2■□□□□ 0.5
TIMP1P01033 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP1P01033 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP1P01033 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP1P01033 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP1P01033 SPDYE19P-201ENST00000338590 713 ntBASIC18.2■□□□□ 0.5
TIMP1P01033 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.2■□□□□ 0.5
TIMP1P01033 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TIMP1P01033 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP1P01033 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
TIMP1P01033 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.2■□□□□ 0.5
TIMP1P01033 AC093004.1-201ENST00000508850 424 ntBASIC18.2■□□□□ 0.5
TIMP1P01033 DOC2GP-202ENST00000514950 1163 ntBASIC18.2■□□□□ 0.5
TIMP1P01033 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.2■□□□□ 0.5
TIMP1P01033 BANF1P1-201ENST00000553684 263 ntBASIC18.2■□□□□ 0.5
TIMP1P01033 AL079307.3-201ENST00000556114 283 ntBASIC18.2■□□□□ 0.5
TIMP1P01033 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.2■□□□□ 0.5
TIMP1P01033 MIR4492-201ENST00000581627 80 ntBASIC18.2■□□□□ 0.5
TIMP1P01033 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.2■□□□□ 0.5
TIMP1P01033 AL133215.2-201ENST00000609242 977 ntBASIC18.2■□□□□ 0.5
TIMP1P01033 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.2■□□□□ 0.5
TIMP1P01033 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP1P01033 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TIMP1P01033 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.2■□□□□ 0.5
TIMP1P01033 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.2■□□□□ 0.5
TIMP1P01033 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP1P01033 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP1P01033 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TIMP1P01033 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP1P01033 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP1P01033 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.19■□□□□ 0.5
TIMP1P01033 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMP1P01033 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
TIMP1P01033 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms