Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
GGPS1O95749 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.08■□□□□ 0.65
GGPS1O95749 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
GGPS1O95749 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
GGPS1O95749 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.08■□□□□ 0.65
GGPS1O95749 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
GGPS1O95749 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.08■□□□□ 0.65
GGPS1O95749 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.08■□□□□ 0.65
GGPS1O95749 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.08■□□□□ 0.65
GGPS1O95749 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GGPS1O95749 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.08■□□□□ 0.64
GGPS1O95749 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
GGPS1O95749 TSEN15P1-201ENST00000423257 515 ntBASIC19.08■□□□□ 0.64
GGPS1O95749 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.08■□□□□ 0.64
GGPS1O95749 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.08■□□□□ 0.64
GGPS1O95749 RFPL4AP1-201ENST00000530883 850 ntBASIC19.08■□□□□ 0.64
GGPS1O95749 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.08■□□□□ 0.64
GGPS1O95749 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
GGPS1O95749 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.08■□□□□ 0.64
GGPS1O95749 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.08■□□□□ 0.64
GGPS1O95749 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
GGPS1O95749 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
GGPS1O95749 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.08■□□□□ 0.64
GGPS1O95749 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GGPS1O95749 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.08■□□□□ 0.64
GGPS1O95749 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GGPS1O95749 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.08■□□□□ 0.64
GGPS1O95749 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GGPS1O95749 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GGPS1O95749 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GGPS1O95749 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GGPS1O95749 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.08■□□□□ 0.64
GGPS1O95749 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GGPS1O95749 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
GGPS1O95749 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GGPS1O95749 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 AL138688.1-201ENST00000624851 1594 ntBASIC19.07■□□□□ 0.64
GGPS1O95749 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.07■□□□□ 0.64
GGPS1O95749 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
GGPS1O95749 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
GGPS1O95749 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 AL139400.1-201ENST00000366220 510 ntBASIC19.07■□□□□ 0.64
GGPS1O95749 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.07■□□□□ 0.64
GGPS1O95749 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
GGPS1O95749 HMGA1P7-201ENST00000406908 502 ntBASIC19.07■□□□□ 0.64
GGPS1O95749 AL355306.1-201ENST00000415580 579 ntBASIC19.07■□□□□ 0.64
GGPS1O95749 TIMM8BP1-201ENST00000452384 211 ntBASIC19.07■□□□□ 0.64
GGPS1O95749 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.07■□□□□ 0.64
GGPS1O95749 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
GGPS1O95749 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.07■□□□□ 0.64
GGPS1O95749 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.07■□□□□ 0.64
GGPS1O95749 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
GGPS1O95749 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
GGPS1O95749 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
GGPS1O95749 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.07■□□□□ 0.64
GGPS1O95749 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
GGPS1O95749 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.07■□□□□ 0.64
GGPS1O95749 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.07■□□□□ 0.64
GGPS1O95749 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GGPS1O95749 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.06■□□□□ 0.64
GGPS1O95749 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.06■□□□□ 0.64
GGPS1O95749 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
GGPS1O95749 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
GGPS1O95749 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
GGPS1O95749 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.06■□□□□ 0.64
GGPS1O95749 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
GGPS1O95749 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.06■□□□□ 0.64
GGPS1O95749 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 AL645939.2-201ENST00000427340 991 ntBASIC19.06■□□□□ 0.64
GGPS1O95749 AL671277.1-201ENST00000429656 993 ntBASIC19.06■□□□□ 0.64
GGPS1O95749 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.06■□□□□ 0.64
GGPS1O95749 CYMP-203ENST00000474680 1263 ntBASIC19.06■□□□□ 0.64
GGPS1O95749 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
GGPS1O95749 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.06■□□□□ 0.64
GGPS1O95749 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.06■□□□□ 0.64
GGPS1O95749 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.06■□□□□ 0.64
GGPS1O95749 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.06■□□□□ 0.64
GGPS1O95749 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms