Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GFRA3O60609 SLC25A47P1-201ENST00000531577 414 ntBASIC16.38■□□□□ 0.21
GFRA3O60609 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.38■□□□□ 0.21
GFRA3O60609 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.38■□□□□ 0.21
GFRA3O60609 AC091271.1-201ENST00000611877 1162 ntBASIC16.38■□□□□ 0.21
GFRA3O60609 AC128714.1-201ENST00000637035 887 ntBASIC16.38■□□□□ 0.21
GFRA3O60609 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.38■□□□□ 0.21
GFRA3O60609 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.38■□□□□ 0.21
GFRA3O60609 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.38■□□□□ 0.21
GFRA3O60609 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GFRA3O60609 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFRA3O60609 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
GFRA3O60609 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
GFRA3O60609 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.37■□□□□ 0.21
GFRA3O60609 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.37■□□□□ 0.21
GFRA3O60609 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.37■□□□□ 0.21
GFRA3O60609 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.37■□□□□ 0.21
GFRA3O60609 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 PHGDH-209ENST00000641074 1780 ntBASIC16.37■□□□□ 0.21
GFRA3O60609 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
GFRA3O60609 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.37■□□□□ 0.21
GFRA3O60609 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.37■□□□□ 0.21
GFRA3O60609 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.37■□□□□ 0.21
GFRA3O60609 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.37■□□□□ 0.21
GFRA3O60609 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.37■□□□□ 0.21
GFRA3O60609 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.37■□□□□ 0.21
GFRA3O60609 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.37■□□□□ 0.21
GFRA3O60609 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.37■□□□□ 0.21
GFRA3O60609 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.37■□□□□ 0.21
GFRA3O60609 AC010328.2-201ENST00000597698 1111 ntBASIC16.37■□□□□ 0.21
GFRA3O60609 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.37■□□□□ 0.21
GFRA3O60609 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 AL161938.1-201ENST00000569833 2180 ntBASIC16.37■□□□□ 0.21
GFRA3O60609 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GFRA3O60609 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
GFRA3O60609 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GFRA3O60609 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.36■□□□□ 0.21
GFRA3O60609 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GFRA3O60609 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
GFRA3O60609 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.36■□□□□ 0.21
GFRA3O60609 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.36■□□□□ 0.21
GFRA3O60609 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.36■□□□□ 0.21
GFRA3O60609 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
GFRA3O60609 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
GFRA3O60609 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.36■□□□□ 0.21
GFRA3O60609 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.36■□□□□ 0.21
GFRA3O60609 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
GFRA3O60609 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.36■□□□□ 0.21
GFRA3O60609 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.36■□□□□ 0.21
GFRA3O60609 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
GFRA3O60609 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
GFRA3O60609 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
GFRA3O60609 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
GFRA3O60609 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.36■□□□□ 0.21
GFRA3O60609 AP001258.2-201ENST00000529891 490 ntBASIC16.36■□□□□ 0.21
GFRA3O60609 AL133215.2-201ENST00000609242 977 ntBASIC16.36■□□□□ 0.21
GFRA3O60609 MIR7845-201ENST00000618396 99 ntBASIC16.36■□□□□ 0.21
GFRA3O60609 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
GFRA3O60609 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.36■□□□□ 0.21
GFRA3O60609 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
GFRA3O60609 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GFRA3O60609 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
GFRA3O60609 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
GFRA3O60609 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GFRA3O60609 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
GFRA3O60609 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GFRA3O60609 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GFRA3O60609 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
GFRA3O60609 AC125437.2-201ENST00000625180 2167 ntBASIC16.36■□□□□ 0.21
GFRA3O60609 AC046185.3-201ENST00000623228 1824 ntBASIC16.35■□□□□ 0.21
GFRA3O60609 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.35■□□□□ 0.21
GFRA3O60609 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.35■□□□□ 0.21
GFRA3O60609 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GFRA3O60609 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.35■□□□□ 0.21
GFRA3O60609 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GFRA3O60609 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GFRA3O60609 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.35■□□□□ 0.21
GFRA3O60609 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.35■□□□□ 0.21
GFRA3O60609 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.35■□□□□ 0.21
GFRA3O60609 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
GFRA3O60609 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.35■□□□□ 0.21
GFRA3O60609 RPS2P36-201ENST00000456516 831 ntBASIC16.35■□□□□ 0.21
GFRA3O60609 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.35■□□□□ 0.21
GFRA3O60609 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.35■□□□□ 0.21
GFRA3O60609 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.35■□□□□ 0.21
GFRA3O60609 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms