Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COCHO43405 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
COCHO43405 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
COCHO43405 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.54■□□□□ 0.4
COCHO43405 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COCHO43405 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COCHO43405 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COCHO43405 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
COCHO43405 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COCHO43405 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COCHO43405 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COCHO43405 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
COCHO43405 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.54■□□□□ 0.4
COCHO43405 AL671277.1-201ENST00000429656 993 ntBASIC17.54■□□□□ 0.4
COCHO43405 METTL21AP1-201ENST00000438852 635 ntBASIC17.54■□□□□ 0.4
COCHO43405 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.54■□□□□ 0.4
COCHO43405 AC124947.2-201ENST00000547118 1133 ntBASIC17.54■□□□□ 0.4
COCHO43405 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.54■□□□□ 0.4
COCHO43405 AC022145.2-201ENST00000598203 171 ntBASIC17.54■□□□□ 0.4
COCHO43405 AL009183.1-201ENST00000603760 355 ntBASIC17.54■□□□□ 0.4
COCHO43405 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.54■□□□□ 0.4
COCHO43405 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.54■□□□□ 0.4
COCHO43405 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COCHO43405 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.54■□□□□ 0.4
COCHO43405 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COCHO43405 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COCHO43405 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COCHO43405 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COCHO43405 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.54■□□□□ 0.4
COCHO43405 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COCHO43405 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
COCHO43405 FZD10-202ENST00000539839 3282 ntBASIC17.53■□□□□ 0.4
COCHO43405 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.53■□□□□ 0.4
COCHO43405 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.53■□□□□ 0.4
COCHO43405 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 AC131009.4-201ENST00000624048 1740 ntBASIC17.53■□□□□ 0.4
COCHO43405 AC139713.2-201ENST00000641328 2723 ntBASIC17.53■□□□□ 0.4
COCHO43405 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.53■□□□□ 0.4
COCHO43405 AC087641.1-201ENST00000557561 1021 ntBASIC17.53■□□□□ 0.4
COCHO43405 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.53■□□□□ 0.4
COCHO43405 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.53■□□□□ 0.4
COCHO43405 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.53■□□□□ 0.4
COCHO43405 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
COCHO43405 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COCHO43405 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COCHO43405 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
COCHO43405 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COCHO43405 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.52■□□□□ 0.4
COCHO43405 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COCHO43405 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.52■□□□□ 0.4
COCHO43405 AL023806.1-201ENST00000603994 1649 ntBASIC17.52■□□□□ 0.4
COCHO43405 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COCHO43405 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.52■□□□□ 0.4
COCHO43405 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.52■□□□□ 0.4
COCHO43405 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COCHO43405 TIMM8BP1-201ENST00000452384 211 ntBASIC17.52■□□□□ 0.4
COCHO43405 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COCHO43405 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.52■□□□□ 0.4
COCHO43405 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.52■□□□□ 0.4
COCHO43405 KRT8P48-201ENST00000515599 1220 ntBASIC17.52■□□□□ 0.4
COCHO43405 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.52■□□□□ 0.4
COCHO43405 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.52■□□□□ 0.4
COCHO43405 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COCHO43405 AC004835.2-201ENST00000603762 682 ntBASIC17.52■□□□□ 0.4
COCHO43405 AC026120.1-201ENST00000611536 926 ntBASIC17.52■□□□□ 0.4
COCHO43405 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.52■□□□□ 0.4
COCHO43405 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
COCHO43405 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.52■□□□□ 0.4
COCHO43405 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COCHO43405 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COCHO43405 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.52■□□□□ 0.4
COCHO43405 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
COCHO43405 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COCHO43405 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.52■□□□□ 0.39
COCHO43405 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COCHO43405 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COCHO43405 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COCHO43405 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COCHO43405 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COCHO43405 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COCHO43405 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COCHO43405 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms