Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC22.55■■□□□ 1.2
PIK3C2AO00443 MPI-209ENST00000564003 1195 ntTSL 2 BASIC22.55■■□□□ 1.2
PIK3C2AO00443 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC22.55■■□□□ 1.2
PIK3C2AO00443 AL133215.2-201ENST00000609242 977 ntBASIC22.55■■□□□ 1.2
PIK3C2AO00443 AC003101.2-201ENST00000612557 442 ntBASIC22.55■■□□□ 1.2
PIK3C2AO00443 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PIK3C2AO00443 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PIK3C2AO00443 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
PIK3C2AO00443 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PIK3C2AO00443 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC22.54■■□□□ 1.2
PIK3C2AO00443 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PIK3C2AO00443 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.54■■□□□ 1.2
PIK3C2AO00443 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PIK3C2AO00443 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC22.54■■□□□ 1.2
PIK3C2AO00443 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC22.54■■□□□ 1.2
PIK3C2AO00443 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC22.54■■□□□ 1.2
PIK3C2AO00443 GRAMD4P3-201ENST00000621665 1669 ntBASIC22.54■■□□□ 1.2
PIK3C2AO00443 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PIK3C2AO00443 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC22.54■■□□□ 1.2
PIK3C2AO00443 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PIK3C2AO00443 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
PIK3C2AO00443 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC22.54■■□□□ 1.2
PIK3C2AO00443 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PIK3C2AO00443 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PIK3C2AO00443 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PIK3C2AO00443 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PIK3C2AO00443 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PIK3C2AO00443 AC134043.2-201ENST00000624206 2238 ntBASIC22.54■■□□□ 1.2
PIK3C2AO00443 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PIK3C2AO00443 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PIK3C2AO00443 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PIK3C2AO00443 LINC02012-201ENST00000608206 1725 ntBASIC22.53■■□□□ 1.2
PIK3C2AO00443 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PIK3C2AO00443 AL671710.1-201ENST00000610245 2349 ntBASIC22.53■■□□□ 1.2
PIK3C2AO00443 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PIK3C2AO00443 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PIK3C2AO00443 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PIK3C2AO00443 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 AC013467.2-201ENST00000605472 835 ntBASIC22.53■■□□□ 1.2
PIK3C2AO00443 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PIK3C2AO00443 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PIK3C2AO00443 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PIK3C2AO00443 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PIK3C2AO00443 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PIK3C2AO00443 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 CROCCP2-202ENST00000412962 2773 ntBASIC22.53■■□□□ 1.2
PIK3C2AO00443 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PIK3C2AO00443 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC22.53■■□□□ 1.2
PIK3C2AO00443 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PIK3C2AO00443 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PIK3C2AO00443 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PIK3C2AO00443 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PIK3C2AO00443 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
PIK3C2AO00443 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC22.52■■□□□ 1.2
PIK3C2AO00443 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC22.52■■□□□ 1.2
PIK3C2AO00443 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PIK3C2AO00443 AC063926.2-201ENST00000623766 1308 ntBASIC22.52■■□□□ 1.2
PIK3C2AO00443 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PIK3C2AO00443 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PIK3C2AO00443 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PIK3C2AO00443 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PIK3C2AO00443 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PIK3C2AO00443 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PIK3C2AO00443 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC22.52■■□□□ 1.2
PIK3C2AO00443 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC22.52■■□□□ 1.2
PIK3C2AO00443 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC22.52■■□□□ 1.2
PIK3C2AO00443 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PIK3C2AO00443 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC22.52■■□□□ 1.2
PIK3C2AO00443 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PIK3C2AO00443 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC22.52■■□□□ 1.2
PIK3C2AO00443 AL662799.1-202ENST00000614205 422 ntBASIC22.52■■□□□ 1.2
PIK3C2AO00443 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PIK3C2AO00443 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PIK3C2AO00443 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PIK3C2AO00443 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC22.52■■□□□ 1.2
PIK3C2AO00443 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PIK3C2AO00443 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PIK3C2AO00443 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PIK3C2AO00443 GOLGA2P9-201ENST00000596977 1937 ntBASIC22.51■■□□□ 1.19
PIK3C2AO00443 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PIK3C2AO00443 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PIK3C2AO00443 AL596325.1-201ENST00000563991 1082 ntBASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms