Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 RPL13AP23-201ENST00000480739 586 ntBASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC122714.2-201ENST00000502787 707 ntBASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MTDHP4-201ENST00000600287 670 ntBASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC116407.3-201ENST00000623905 1129 ntBASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC106886.4-201ENST00000623557 2502 ntBASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC116353.5-201ENST00000638148 1699 ntBASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC010460.3-201ENST00000511359 1579 ntBASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC060834.1-201ENST00000443027 2032 ntBASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 KRT18P58-201ENST00000527480 1120 ntBASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SLC25A1P1-201ENST00000528351 927 ntBASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MIR7706-201ENST00000613747 67 ntBASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AP000867.4-201ENST00000641616 219 ntBASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRBV4S1A1TA0A5B7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MIR574-201ENST00000385209 96 ntBASIC13.74□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms