Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 AC211486.1-202ENST00000416371 468 ntBASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 AC120057.1-201ENST00000483947 663 ntBASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 AC211476.1-201ENST00000503899 468 ntBASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 AC136632.2-201ENST00000512891 861 ntBASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 AC027796.2-201ENST00000575326 344 ntBASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 AC022211.2-201ENST00000585075 2527 ntBASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 AC097637.2-201ENST00000624096 1997 ntBASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 AC023274.1-201ENST00000418278 595 ntBASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDHB11Q9Y5F2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 AL121761.2-201ENST00000598007 1648 ntBASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 NCF1C-201ENST00000438382 1427 ntBASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms