Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHB13Q9Y5F0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
PCDHB13Q9Y5F0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
PCDHB13Q9Y5F0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
PCDHB13Q9Y5F0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.89■□□□□ 0.62
PCDHB13Q9Y5F0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB13Q9Y5F0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.89■□□□□ 0.62
PCDHB13Q9Y5F0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.89■□□□□ 0.62
PCDHB13Q9Y5F0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB13Q9Y5F0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 HNRNPDP1-201ENST00000439535 754 ntBASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 FRMD8P1-201ENST00000440433 1524 ntBASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB13Q9Y5F0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 AD000864.1-201ENST00000624076 2295 ntBASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 AL773604.1-201ENST00000617417 272 ntBASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 AC008735.5-201ENST00000623544 497 ntBASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms