Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 SNHG9-202ENST00000564014 471 ntBASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 AC004877.2-201ENST00000623941 599 ntBASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 AC010507.1-201ENST00000633895 436 ntBASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 AC254562.1-201ENST00000417586 456 ntBASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 AC096734.2-201ENST00000562054 433 ntBASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 GGTLC5P-201ENST00000617623 998 ntBASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC6Q9UBN7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 AL355312.1-201ENST00000407115 2176 ntBASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 BCAR1-209ENST00000546196 1340 ntBASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 AL023806.1-201ENST00000603994 1649 ntBASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 MKNK2P1-201ENST00000437526 628 ntBASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 METTL21AP1-201ENST00000438852 635 ntBASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 KRT18P55-202ENST00000578578 1546 ntBASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC6Q9UBN7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 MYCLP1-201ENST00000372451 1075 ntBASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 PDPK2P-202ENST00000562415 1191 ntBASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 ELL2P1-201ENST00000413990 1906 ntBASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC6Q9UBN7 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms