Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 MED15P5-201ENST00000423150 992 ntBASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 AC103564.2-201ENST00000432853 1299 ntBASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 AC092910.1-201ENST00000482027 1129 ntBASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 NKAPP1-205ENST00000585790 367 ntBASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 Z83851.2-201ENST00000609564 659 ntBASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 PGM5P2-202ENST00000637225 1043 ntBASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 AC046158.3-201ENST00000624947 2558 ntBASIC17.3■□□□□ 0.36
NCKIPSDQ9NZQ3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 AC098831.1-202ENST00000438821 336 ntBASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 AL022326.1-202ENST00000641533 845 ntBASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 CROCCP1-201ENST00000426910 5675 ntBASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.29■□□□□ 0.36
NCKIPSDQ9NZQ3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKIPSDQ9NZQ3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms