Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 RN7SL606P-201ENST00000472779 293 ntBASIC16.95■□□□□ 0.3
SSU72Q9NP77 AC005336.2-201ENST00000593183 939 ntBASIC16.95■□□□□ 0.3
SSU72Q9NP77 AC013467.2-201ENST00000605472 835 ntBASIC16.95■□□□□ 0.3
SSU72Q9NP77 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.95■□□□□ 0.3
SSU72Q9NP77 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.95■□□□□ 0.3
SSU72Q9NP77 AL513477.1-201ENST00000602865 2407 ntBASIC16.95■□□□□ 0.3
SSU72Q9NP77 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 AL356309.3-201ENST00000624132 1934 ntBASIC16.94■□□□□ 0.3
SSU72Q9NP77 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 KLF4P1-201ENST00000412782 1185 ntBASIC16.94■□□□□ 0.3
SSU72Q9NP77 SLC25A3P1-201ENST00000443844 931 ntBASIC16.94■□□□□ 0.3
SSU72Q9NP77 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 AC145285.6-201ENST00000604632 637 ntBASIC16.94■□□□□ 0.3
SSU72Q9NP77 AD001527.2-201ENST00000622994 785 ntBASIC16.94■□□□□ 0.3
SSU72Q9NP77 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.94■□□□□ 0.3
SSU72Q9NP77 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSU72Q9NP77 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 AL596087.1-201ENST00000400979 1969 ntBASIC16.93■□□□□ 0.3
SSU72Q9NP77 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 ACTG1P4-201ENST00000425123 1122 ntBASIC16.93■□□□□ 0.3
SSU72Q9NP77 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms