Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 PTCHD3P3-201ENST00000403073 906 ntBASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 KRT19P2-202ENST00000557173 1012 ntBASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP1Q9BWH6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 LINC02012-201ENST00000608206 1725 ntBASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 AC093525.9-201ENST00000624961 1746 ntBASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP1Q9BWH6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 AC027612.4-201ENST00000605371 583 ntBASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP1Q9BWH6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPAP1Q9BWH6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.64■□□□□ 0.9
RPAP1Q9BWH6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RPAP1Q9BWH6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPAP1Q9BWH6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.64■□□□□ 0.9
RPAP1Q9BWH6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
RPAP1Q9BWH6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP1Q9BWH6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP1Q9BWH6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.64■□□□□ 0.89
RPAP1Q9BWH6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP1Q9BWH6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP1Q9BWH6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP1Q9BWH6 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.64■□□□□ 0.89
RPAP1Q9BWH6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms