Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 HLA-J-203ENST00000494367 1087 ntBASIC19.8■□□□□ 0.76
CCDC17Q96LX7 AC243562.1-201ENST00000560672 389 ntBASIC19.8■□□□□ 0.76
CCDC17Q96LX7 AL135744.1-201ENST00000565098 629 ntBASIC19.8■□□□□ 0.76
CCDC17Q96LX7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 AL031055.1-201ENST00000606362 631 ntBASIC19.8■□□□□ 0.76
CCDC17Q96LX7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC17Q96LX7 TUBB8P12-201ENST00000308911 1335 ntBASIC19.79■□□□□ 0.76
CCDC17Q96LX7 TUBB7P-202ENST00000428444 1305 ntBASIC19.79■□□□□ 0.76
CCDC17Q96LX7 TUBB8P7-204ENST00000567960 1332 ntBASIC19.79■□□□□ 0.76
CCDC17Q96LX7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 AL133373.2-201ENST00000623187 2828 ntBASIC19.79■□□□□ 0.76
CCDC17Q96LX7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 AL139400.1-201ENST00000366220 510 ntBASIC19.79■□□□□ 0.76
CCDC17Q96LX7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 AL627223.1-201ENST00000416693 442 ntBASIC19.79■□□□□ 0.76
CCDC17Q96LX7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 AC079140.1-201ENST00000508039 487 ntBASIC19.79■□□□□ 0.76
CCDC17Q96LX7 RFPL4AP1-201ENST00000530883 850 ntBASIC19.79■□□□□ 0.76
CCDC17Q96LX7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 AL355385.1-201ENST00000606123 409 ntBASIC19.79■□□□□ 0.76
CCDC17Q96LX7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC17Q96LX7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC17Q96LX7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms