Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
NUDCD3Q8IVD9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.02■□□□□ 0.31
NUDCD3Q8IVD9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.02■□□□□ 0.31
NUDCD3Q8IVD9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NUDCD3Q8IVD9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NUDCD3Q8IVD9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NUDCD3Q8IVD9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.02■□□□□ 0.31
NUDCD3Q8IVD9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NUDCD3Q8IVD9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.02■□□□□ 0.31
NUDCD3Q8IVD9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NUDCD3Q8IVD9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 SLC25A3P1-201ENST00000443844 931 ntBASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 AL049757.1-201ENST00000616842 1596 ntBASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 HLA-A-202ENST00000376806 1854 ntBASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NUDCD3Q8IVD9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 LIN28AP1-201ENST00000429574 405 ntBASIC17■□□□□ 0.31
NUDCD3Q8IVD9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 AL359075.1-203ENST00000462729 1002 ntBASIC17■□□□□ 0.31
NUDCD3Q8IVD9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 AC011558.1-201ENST00000623459 338 ntBASIC17■□□□□ 0.31
NUDCD3Q8IVD9 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUDCD3Q8IVD9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 AC007950.2-201ENST00000615045 2347 ntBASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 GPR89P-201ENST00000407924 1495 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms