Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.08■□□□□ 0.96
CHD1LQ86WJ1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHD1LQ86WJ1 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.08■□□□□ 0.96
CHD1LQ86WJ1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CHD1LQ86WJ1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CHD1LQ86WJ1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD1LQ86WJ1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD1LQ86WJ1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 AC091304.2-201ENST00000564639 760 ntBASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 AL139424.1-201ENST00000607572 797 ntBASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 AL589182.2-201ENST00000619332 1049 ntBASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHD1LQ86WJ1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 AKR1C7P-201ENST00000305623 895 ntBASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 REXO1L6P-202ENST00000619970 1078 ntBASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 AL021920.2-201ENST00000624828 1351 ntBASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD1LQ86WJ1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 AC008608.2-201ENST00000606089 416 ntBASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
CHD1LQ86WJ1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 KRT8P49-201ENST00000604166 1432 ntBASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 LINC00895-201ENST00000629028 1637 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms