Protein–RNA interactions for Protein: Q15915

ZIC1, Zinc finger protein ZIC 1, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1Q15915 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
ZIC1Q15915 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
ZIC1Q15915 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.29■□□□□ 0.2
ZIC1Q15915 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 RPSAP43-201ENST00000402237 625 ntBASIC16.29■□□□□ 0.2
ZIC1Q15915 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ZIC1Q15915 MCCD1P2-201ENST00000423228 335 ntBASIC16.29■□□□□ 0.2
ZIC1Q15915 GPX1P2-201ENST00000429271 606 ntBASIC16.29■□□□□ 0.2
ZIC1Q15915 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.29■□□□□ 0.2
ZIC1Q15915 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.29■□□□□ 0.2
ZIC1Q15915 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ZIC1Q15915 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.29■□□□□ 0.2
ZIC1Q15915 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ZIC1Q15915 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.29■□□□□ 0.2
ZIC1Q15915 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.29■□□□□ 0.2
ZIC1Q15915 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.29■□□□□ 0.2
ZIC1Q15915 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.29■□□□□ 0.2
ZIC1Q15915 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.29■□□□□ 0.2
ZIC1Q15915 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ZIC1Q15915 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 AC106820.2-201ENST00000563775 3264 ntBASIC16.29■□□□□ 0.2
ZIC1Q15915 HCG11-201ENST00000411553 5696 ntBASIC16.29■□□□□ 0.2
ZIC1Q15915 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.29■□□□□ 0.2
ZIC1Q15915 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
ZIC1Q15915 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ZIC1Q15915 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.29■□□□□ 0.2
ZIC1Q15915 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.28■□□□□ 0.2
ZIC1Q15915 AC022211.2-201ENST00000585075 2527 ntBASIC16.28■□□□□ 0.2
ZIC1Q15915 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ZIC1Q15915 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.28■□□□□ 0.2
ZIC1Q15915 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 LTB4R2-202ENST00000528054 3092 ntBASIC16.28■□□□□ 0.2
ZIC1Q15915 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ZIC1Q15915 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 UPF3AP3-201ENST00000420996 769 ntBASIC16.28■□□□□ 0.2
ZIC1Q15915 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.28■□□□□ 0.2
ZIC1Q15915 AC112482.1-201ENST00000492080 688 ntBASIC16.28■□□□□ 0.2
ZIC1Q15915 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
ZIC1Q15915 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.28■□□□□ 0.2
ZIC1Q15915 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ZIC1Q15915 PDPK2P-202ENST00000562415 1191 ntBASIC16.28■□□□□ 0.2
ZIC1Q15915 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.28■□□□□ 0.2
ZIC1Q15915 AC139530.3-201ENST00000620344 690 ntBASIC16.28■□□□□ 0.2
ZIC1Q15915 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.28■□□□□ 0.2
ZIC1Q15915 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.28■□□□□ 0.2
ZIC1Q15915 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.28■□□□□ 0.2
ZIC1Q15915 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ZIC1Q15915 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.28■□□□□ 0.2
ZIC1Q15915 HTR7P1-202ENST00000624664 4411 ntBASIC16.28■□□□□ 0.2
ZIC1Q15915 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZIC1Q15915 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.28■□□□□ 0.2
ZIC1Q15915 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZIC1Q15915 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZIC1Q15915 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ZIC1Q15915 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZIC1Q15915 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZIC1Q15915 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZIC1Q15915 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.27■□□□□ 0.2
ZIC1Q15915 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZIC1Q15915 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ZIC1Q15915 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZIC1Q15915 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.27■□□□□ 0.2
ZIC1Q15915 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ZIC1Q15915 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.27■□□□□ 0.2
ZIC1Q15915 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms